PDK_20s1355821g002 (Phoenix dactylifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PDK_20s1355821g002 T010338_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.856 0.961
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.856 0.961
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.728 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1355821g002 AP2 6 57

Links

Other AP2 family TFs
Other Phoenix dactylifera TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N
AT3G54390 Arabidopsis thaliana AT3G54390 N
Bo8g068640 Brassica oleracea Bo8g068640 N
Bo8g083630 Brassica oleracea Bo8g083630 N
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N
Bra007069 Brassica rapa Bra007069 N
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N
Carubv10019255m.g Capsella rubella Carubv10019255m.g N
cassava22232.valid.m1 Manihot esculenta cassava22232.valid.m1 N
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N
Cla010096 Citrullus lanatus Cla010096 N
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N
GLYMA13G26550 Glycine max GLYMA13G26550 N
GLYMA15G37451 Glycine max GLYMA15G37451 N
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N
MDP0000123719 Malus domestica MDP0000123719 N
MDP0000727700 Malus domestica MDP0000727700 N
Pm016744 Prunus mume Pm016744 N
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N