fgenesh2_kg.5__1832__AT3G54390.1 (Arabidopsis lyrata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 fgenesh2_kg.5__1832__AT3G54390.1 T249065_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1832__AT3G54390.1 MADF 46 122

Links

Other MADF family TFs
Other Arabidopsis lyrata TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N 0.970
Carubv10019255m.g Capsella rubella Carubv10019255m.g N 0.970
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N 0.970
Bra007069 Brassica rapa Bra007069 N 0.966
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N 0.964
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N 0.964
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N 0.964
AT3G54390 Arabidopsis thaliana AT3G54390 N 0.960
cassava22232.valid.m1 Manihot esculenta cassava22232.valid.m1 N 0.960
Bo8g083630 Brassica oleracea Bo8g083630 N 0.956
GLYMA13G26550 Glycine max GLYMA13G26550 N 0.955
Pm016744 Prunus mume Pm016744 N 0.952
Bo8g068640 Brassica oleracea Bo8g068640 N 0.951
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N 0.951
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N 0.951
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N 0.951
Cla010096 Citrullus lanatus Cla010096 N 0.944
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N 0.942
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N 0.941
MDP0000727700 Malus domestica MDP0000727700 N 0.938
MDP0000123719 Malus domestica MDP0000123719 N 0.938
GLYMA11G25570 Glycine max GLYMA11G25570 N 0.935
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N 0.918
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N 0.912
GLYMA15G37451 Glycine max GLYMA15G37451 N 0.909