estExt_Genewise1.C_120474 (Mycosphaerella fijiensis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1.C_120474 T013917_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.5.76.1
M01652_2.00 		Nectria haematococca
NNVTGCABNN
NNVTGCABNN		 PBM
Weirauch et al.(2014)
pTH9267 		0.845 0.940
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.820 0.916
stuA
M01649_2.00 		Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN		 PBM
Weirauch et al.(2014)
pTH9236 		0.706 0.867
stuA
M09761_2.00 		Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH		 Transfac
Matys et al.(2006)
F$STUAP_01 		0.706 0.867
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_120474 APSES 128 215

Links

Other APSES family TFs
Other Mycosphaerella fijiensis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025611 Oryza indica BGIOSGA025611 N 0.000
F775_15026 Aegilops tauschii F775_15026 N 0.000
F775_15149 Aegilops tauschii F775_15149 N 0.000
F775_28763 Aegilops tauschii F775_28763 N 0.000
MLOC_51469 Hordeum vulgare MLOC_51469 N 0.000
MLOC_53626 Hordeum vulgare MLOC_53626 N 0.000
MLOC_53627 Hordeum vulgare MLOC_53627 N 0.000
MLOC_53628 Hordeum vulgare MLOC_53628 N 0.000
OGLUM05G09300 Oryza glumaepatula OGLUM05G09300 N 0.000
OLONG_021317 Oryza longistaminata OLONG_021317 N 0.000
ONIVA04G07260 Oryza nivara ONIVA04G07260 N 0.000
ORGLA07G0107400 Oryza glaberrima ORGLA07G0107400 N 0.000
ORUFI07G12800 Oryza rufipogon ORUFI07G12800 N 0.000
OS07G0443500 Oryza sativa OS07G0443500 N 0.000
Pavir.Ca00951 Panicum virgatum Pavir.Ca00951 N 0.000
Pavir.J09915 Panicum virgatum Pavir.J09915 N 0.000
Pavir.J28254 Panicum virgatum Pavir.J28254 N 0.000
Si024486m.g Setaria italica Si024486m.g N 0.000
Traes_1AL_6A75A61AC Triticum aestivum Traes_1AL_6A75A61AC N 0.000
Traes_1BL_0C01933E1 Triticum aestivum Traes_1BL_0C01933E1 N 0.000
Traes_1BL_119609AE8 Triticum aestivum Traes_1BL_119609AE8 N 0.000
Traes_1BL_5E492444E Triticum aestivum Traes_1BL_5E492444E N 0.000
Traes_1BL_B30884E0E Triticum aestivum Traes_1BL_B30884E0E N 0.000
TRIUR3_01735 Triticum urartu TRIUR3_01735 N 0.000
TRIUR3_06411 Triticum urartu TRIUR3_06411 N 0.000
TRIUR3_26254 Triticum urartu TRIUR3_26254 N 0.000
TRIUR3_26255 Triticum urartu TRIUR3_26255 N 0.000