ARID5A (Equus caballus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSECAG00000023667 T014522_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.785 0.988
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.785 0.988
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.649 0.647
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.632 0.753
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.632 0.753
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.632 0.753
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.632 0.753
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.493 0.600
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000021115 ARID/BRIGHT 58 143

Links

Other ARID/BRIGHT family TFs
Other Equus caballus TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N
ENSP00000311196 Macaca fascicularis ENSP00000311196 N
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N
npas4 Xenopus tropicalis XB-GENE-993002 N
NPAS4 Ochotona princeps ENSOPRG00000008977 N
NPAS4 Pan troglodytes ENSPTRG00000003923 N
NPAS4 Tursiops truncatus ENSTTRG00000001951 N
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N
Npas4 Rattus norvegicus ENSRNOG00000020009 N
NPAS4 Sorex araneus ENSSARG00000003603 N
NPAS4 Sus scrofa ENSSSCG00000012942 N
NPAS4 Echinops telfairi ENSETEG00000003654 N
NPAS4 Bos taurus ENSBTAG00000014925 N
NPAS4 Canis familiaris ENSCAFG00000012711 N
NPAS4 Callithrix jacchus ENSCJAG00000001482 N
NPAS4 Cavia porcellus ENSCPOG00000000685 N
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N
NPAS4 Equus caballus ENSECAG00000013683 N
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N
NPAS4 Otolemur garnettii ENSOGAG00000010446 N
NPAS4 Felis catus ENSFCAG00000009299 N
NPAS4 Homo sapiens ENSG00000174576 N
NPAS4 Gorilla gorilla ENSGGOG00000008608 N
NPAS4 Loxodonta africana ENSLAFG00000011138 N
NPAS4 Microcebus murinus ENSMICG00000003754 N
NPAS4 Myotis lucifugus ENSMLUG00000004042 N
NPAS4 Macaca mulatta ENSMMUG00000015982 N
NPAS4 Monodelphis domestica ENSMODG00000008299 N
Npas4 Mus musculus ENSMUSG00000045903 N
NPAS4 Oryctolagus cuniculus ENSOCUG00000000905 N
npas4a Gasterosteus aculeatus ENSGACG00000017076 N
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N
npas4a Takifugu rubripes ENSTRUG00000011857 N
npas4a Danio rerio ENSDARG00000055752 N
npas4a Oryzias latipes ENSORLG00000001999 N
npas4b Danio rerio ENSDARG00000087753 N
Ogr08183 Ophisaurus gracilis Ogr08183 N
Pvit_07066 Pogona vitticeps Pvit_07066 N