Pavir.J03302 (Panicum virgatum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Pavir.J03302 T016171_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J03302.1.p ARID/BRIGHT 581 679

Links

Other ARID/BRIGHT family TFs
Other Panicum virgatum TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004641 Ricinus communis 29929.m004641 I 0.000
BGIOSGA020731 Oryza indica BGIOSGA020731 N 0.000
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.000
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.000
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.000
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.000
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.000
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.000
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.000
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.000
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.000
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.000
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.000
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.000
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.000
LPERR06G19770 Leersia perrieri LPERR06G19770 N 0.000
mgf010397m Mimulus guttatus mgf010397m N 0.000
mgf019346m Mimulus guttatus mgf019346m I 0.000
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.000
OB02G12930 Oryza brachyantha OB02G12930 N 0.000
OB06G31550 Oryza brachyantha OB06G31550 N 0.000
OBART02G03260 Oryza barthii OBART02G03260 N 0.000
OBART06G23820 Oryza barthii OBART06G23820 N 0.000
OGLUM06G25070 Oryza glumaepatula OGLUM06G25070 N 0.000
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.000
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.000
OMERI06G23750 Oryza meridionalis OMERI06G23750 N 0.000
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.000
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.000
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.000
ORGLA06G0199900 Oryza glaberrima ORGLA06G0199900 N 0.000
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.000
ORUFI06G25590 Oryza rufipogon ORUFI06G25590 N 0.000
OS02G0139400 Oryza sativa OS02G0139400 N 0.000
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.000
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.000
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.000
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.000
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.000
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.000
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.000
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.000
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.000
Si017749m.g Setaria italica Si017749m.g N 0.000
SPL11 Oryza sativa OS06G0663500 N 0.000
SPL3 Oryza indica BGIOSGA007499 N 0.000
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.000
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.000
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.000