CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000384001
(
Nippostrongylus brasiliensis
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
NBR_0000384001
T016620_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000384001-mRNA-1
ARID/BRIGHT
35
117
ERLVFLEKLTAFWDLQGLEFKPLIVEGKNIDLFKLYKTVNNFGGASTVTSKKLWTQVSRKVNVRNSHGVGSLKSYYTKFVEPF
Links
Other
ARID/BRIGHT
family TFs
Other
Nippostrongylus brasiliensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003125
Ricinus communis
29983.m003125
I
ANAC073
Vitis vinifera
VIT_12s0028g03050
I
BRADI1G69617
Brachypodium distachyon
BRADI1G69617
N
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
cassava17166.m1
Manihot esculenta
cassava17166.m1
I
cassava46566.m1
Manihot esculenta
cassava46566.m1
I
Ciclev10017822m.g
Citrus clementina
Ciclev10017822m.g
I
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
evm.TU.supercontig_83.99
Carica papaya
evm.TU.supercontig_83.99
I
F775_30638
Aegilops tauschii
F775_30638
I
Gorai.008G155200
Gossypium raimondii
Gorai.008G155200
I
GRMZM2G077045
Zea mays
GRMZM2G077045
N
GRMZM2G342647
Zea mays
GRMZM2G342647
N
GRMZM5G894234
Zea mays
GRMZM5G894234
N
GSMUA_Achr6G11230_001
Musa acuminata
GSMUA_Achr6G11230_001
I
LPERR03G07880
Leersia perrieri
LPERR03G07880
N
LPERR05G05170
Leersia perrieri
LPERR05G05170
I
OBART03G08740
Oryza barthii
OBART03G08740
N
OGLUM03G08850
Oryza glumaepatula
OGLUM03G08850
N
OLONG_014784
Oryza longistaminata
OLONG_014784
N
OMERI02G18080
Oryza meridionalis
OMERI02G18080
N
ONIVA06G00900
Oryza nivara
ONIVA06G00900
N
OPUNC03G08410
Oryza punctata
OPUNC03G08410
N
orange1.1g021635m.g
Citrus sinensis
orange1.1g021635m.g
I
ORGLA01G0213300
Oryza glaberrima
ORGLA01G0213300
I
ORGLA03G0084800
Oryza glaberrima
ORGLA03G0084800
N
ORUFI03G08860
Oryza rufipogon
ORUFI03G08860
N
Pavir.Aa00442
Panicum virgatum
Pavir.Aa00442
I
Pavir.Ib00786
Panicum virgatum
Pavir.Ib00786
N
Pavir.J05241
Panicum virgatum
Pavir.J05241
I
PDK_20s1306131g001
Phoenix dactylifera
PDK_20s1306131g001
I
PGSC0003DMG400031753
Solanum tuberosum
PGSC0003DMG400031753
I
PK28347.1
Cannabis sativa
PK28347.1
I
POPTR_0007s01350
Populus trichocarpa
POPTR_0007s01350
I
POPTR_0017s04800
Populus trichocarpa
POPTR_0017s04800
I
SapurV1A.1828s0030
Salix purpurea
SapurV1A.1828s0030
I
SapurV1A.2554s0030
Salix purpurea
SapurV1A.2554s0030
I
SapurV1A.3101s0030
Salix purpurea
SapurV1A.3101s0030
I
Sb01g042570
Sorghum bicolor
Sb01g042570
N
Sb03g030750
Sorghum bicolor
Sb03g030750
I
Si002301m.g
Setaria italica
Si002301m.g
I
Si019444m.g
Setaria italica
Si019444m.g
I
Solyc02g077610.2
Solanum lycopersicum
Solyc02g077610.2
I
TCM_008229
Theobroma cacao
TCM_008229
I
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
TRIUR3_27393
Triticum urartu
TRIUR3_27393
I