CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g042570
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb01g042570
T295499_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g042570.1
NAC/NAM
23
151
PRGVEFNPSDSDILWHLAAEVGNGRTERHPFIHEFIKFVDGDGGFYCRHPQDIPGVRQDGRASYFFHRSFEPCNNENDASNCWKKIGSPRSIILGGTLQGCKEVFALYADMTSDKSSQETDWRLHQYHL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM03G08850
Oryza glumaepatula
OGLUM03G08850
N
0.981
ONIVA06G00900
Oryza nivara
ONIVA06G00900
N
0.981
ORUFI03G08860
Oryza rufipogon
ORUFI03G08860
N
0.981
GRMZM5G894234
Zea mays
GRMZM5G894234
N
0.980
GRMZM2G077045
Zea mays
GRMZM2G077045
N
0.976
GRMZM2G342647
Zea mays
GRMZM2G342647
N
0.976
OMERI02G18080
Oryza meridionalis
OMERI02G18080
N
0.976
OBART03G08740
Oryza barthii
OBART03G08740
N
0.975
OLONG_014784
Oryza longistaminata
OLONG_014784
N
0.975
OPUNC03G08410
Oryza punctata
OPUNC03G08410
N
0.975
ORGLA03G0084800
Oryza glaberrima
ORGLA03G0084800
N
0.975
BRADI1G69617
Brachypodium distachyon
BRADI1G69617
N
0.973
Pavir.Ib00786
Panicum virgatum
Pavir.Ib00786
N
0.972
LPERR03G07880
Leersia perrieri
LPERR03G07880
N
0.949
OB03G19030
Oryza brachyantha
OB03G19030
N
0.927
MLOC_50895
Hordeum vulgare
MLOC_50895
N
0.913
Eucgr.G02349
Eucalyptus grandis
Eucgr.G02349
I
0.889
Aquca_002_01098
Aquilegia coerulea
Aquca_002_01098
I
0.888
POPTR_0010s13980
Populus trichocarpa
POPTR_0010s13980
I
0.887
Traes_4BL_2136196AE
Triticum aestivum
Traes_4BL_2136196AE
N
0.886
PDK_20s1306131g001
Phoenix dactylifera
PDK_20s1306131g001
I
0.886
PGSC0003DMG400000809
Solanum tuberosum
PGSC0003DMG400000809
I
0.882
SOG1
Vitis vinifera
VIT_01s0011g02990
I
0.881
F775_14771
Aegilops tauschii
F775_14771
N
0.879
GLYMA02G11140
Glycine max
GLYMA02G11140
I
0.879
Lus10021708.g
Linum usitatissimum
Lus10021708.g
I
0.879
chr2.CM0749.410.nc
Lotus japonicus
chr2.CM0749.410.nc
I
0.879
SapurV1A.0079s0500
Salix purpurea
SapurV1A.0079s0500
I
0.877
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.874
cassava12330.valid.m1
Manihot esculenta
cassava12330.valid.m1
I
0.874
29738.m001046
Ricinus communis
29738.m001046
I
0.873
MTR_1g093670
Medicago truncatula
MTR_1g093670
I
0.872