CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G106673
(
Zea mays
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GRMZM2G106673
T019401_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G106673_P01
B3
73
164
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRAS
GRMZM2G106673_P02
B3
153
244
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRAS
GRMZM2G106673_P03
B3
73
158
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKC
GRMZM2G106673_P04
B3
73
164
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRAS
GRMZM2G106673_P05
B3
46
137
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRAS
GRMZM2G106673_P06
B3
134
225
FIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRAS
Links
Other
B3
family TFs
Other
Zea mays
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022464
Oryza indica
BGIOSGA022464
N
0.804
Bra035129
Brassica rapa
Bra035129
N
0.707
BRADI1G45517
Brachypodium distachyon
BRADI1G45517
N
0.848
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
0.707
F775_06135
Aegilops tauschii
F775_06135
N
0.761
F775_07987
Aegilops tauschii
F775_07987
N
0.708
GRMZM2G173321
Zea mays
GRMZM2G173321
N
0.870
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
0.804
MLOC_76431
Hordeum vulgare
MLOC_76431
N
0.739
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
0.707
OB06G15600
Oryza brachyantha
OB06G15600
N
0.815
OGLUM06G06330
Oryza glumaepatula
OGLUM06G06330
N
0.793
OLONG_013315
Oryza longistaminata
OLONG_013315
N
0.804
OMERI06G07230
Oryza meridionalis
OMERI06G07230
N
0.804
ONIVA06G07020
Oryza nivara
ONIVA06G07020
N
0.804
orange1.1g026276m.g
Citrus sinensis
orange1.1g026276m.g
N
0.707
ORGLA06G0055700
Oryza glaberrima
ORGLA06G0055700
N
0.804
ORUFI06G06290
Oryza rufipogon
ORUFI06G06290
N
0.804
OS06G0194400
Oryza sativa
OS06G0194400
N
0.804
Pavir.Fb00845
Panicum virgatum
Pavir.Fb00845
N
0.837
Pavir.J28012
Panicum virgatum
Pavir.J28012
N
0.791
Pm005256
Prunus mume
Pm005256
N
0.709
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.717
Sb03g026620
Sorghum bicolor
Sb03g026620
N
0.728
Sb06g028730
Sorghum bicolor
Sb06g028730
N
0.731
Sb07g006170
Sorghum bicolor
Sb07g006170
N
0.870
Si014404m.g
Setaria italica
Si014404m.g
N
0.826
Traes_4AL_1D254E0E4
Triticum aestivum
Traes_4AL_1D254E0E4
N
0.717
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
0.761
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N
0.761
Traes_7DS_C57224E6E
Triticum aestivum
Traes_7DS_C57224E6E
N
0.728
TRIUR3_03303
Triticum urartu
TRIUR3_03303
N
0.739