CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA03G0243900
(
Oryza glaberrima
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ORGLA03G0243900
T020467_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0243900.1
B3
29
119
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
ORGLA03G0243900.1
B3
248
349
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
ORGLA03G0243900.1
B3
416
516
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFQLMNDESKLTMTVHIIRRN
Links
Other
B3
family TFs
Other
Oryza glaberrima
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013136
Oryza indica
BGIOSGA013136
N
0.997
BGIOSGA013139
Oryza indica
BGIOSGA013139
N
0.762
LPERR03G21750
Leersia perrieri
LPERR03G21750
N
0.713
LPERR03G21760
Leersia perrieri
LPERR03G21760
N
0.745
OBART03G26240
Oryza barthii
OBART03G26240
N
1.000
OBART03G26260
Oryza barthii
OBART03G26260
N
0.710
OMERI03G23710
Oryza meridionalis
OMERI03G23710
N
0.972
ONIVA03G27270
Oryza nivara
ONIVA03G27270
N
0.801
OPUNC03G23990
Oryza punctata
OPUNC03G23990
N
0.909
OPUNC03G24010
Oryza punctata
OPUNC03G24010
N
0.769
ORGLA03G0244100
Oryza glaberrima
ORGLA03G0244100
N
0.762