CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA013139
(
Oryza indica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
BGIOSGA013139
T018520_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA013139-PA
B3
29
119
FHRQMSANFEHSMIIPNKFLNQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFRHIENSRFAVLILDSD
BGIOSGA013139-PA
B3
227
328
YVTTMKHSNVNSHHASLVIAKHYACAYFPHTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVCHNHVKEGDICIFHLKNFNWRKFRATVHLLRET
BGIOSGA013139-PA
B3
438
539
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNLLQTEDICLFQLMKNSERGLAMKVHIIRHN
Links
Other
B3
family TFs
Other
Oryza indica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA03G0244100
Oryza glaberrima
ORGLA03G0244100
N
0.972
OPUNC03G24010
Oryza punctata
OPUNC03G24010
N
0.944
OBART03G26260
Oryza barthii
OBART03G26260
N
0.943
OLONG_026959
Oryza longistaminata
OLONG_026959
N
0.935
OPUNC03G23990
Oryza punctata
OPUNC03G23990
N
0.787
BGIOSGA013136
Oryza indica
BGIOSGA013136
N
0.762
OBART03G26240
Oryza barthii
OBART03G26240
N
0.762
OMERI03G23710
Oryza meridionalis
OMERI03G23710
N
0.762
ORGLA03G0243900
Oryza glaberrima
ORGLA03G0243900
N
0.762
LPERR03G21760
Leersia perrieri
LPERR03G21760
N
0.734
LPERR03G21750
Leersia perrieri
LPERR03G21750
N
0.728