CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_026959
(
Oryza longistaminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OLONG_026959
T020197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_026959-R1
B3
1
43
MNKTILQCGWEAFVDAHQIEENDSLLFRHIENSRFAVLILDSD
OLONG_026959-R1
B3
172
273
FVAVMKHSNVNSHRACLIIPKRYASAHFPHESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OLONG_026959-R1
B3
310
406
YLTADRVSLTEEQTLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHN
OLONG_026959-R2
B3
1
43
MNKTILQCGWEAFVDAHQIEENDSLLFRHIENSRFAVLILDSD
OLONG_026959-R2
B3
172
273
FVAVMKHSNVNSHRACLIIPKRYASAHFPHESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OLONG_026959-R2
B3
339
430
MYVSIMNKSNIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFQLMNDEKGPLVFKKEMQI
OLONG_026959-R2
B3
508
609
YVTTMKHSNVNSHHASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVHHNHVKEGDICIFHLKNFTGRKFRATVHLLRET
OLONG_026959-R2
B3
719
811
YVSIMNKSITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHN
OLONG_026959-R3
B3
1
43
MNKTILQCGWEAFVDAHQIEENDSLLFRHIENSRFAVLILDSD
OLONG_026959-R3
B3
133
234
YVTTMKHSNVNSHHASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVHHNHVKEGDICIFHLKNFTGRKFRATVHLLRET
OLONG_026959-R3
B3
344
436
YVSIMNKSITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHN
Links
Other
B3
family TFs
Other
Oryza longistaminata
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013139
Oryza indica
BGIOSGA013139
N
0.935
OBART03G26260
Oryza barthii
OBART03G26260
N
0.935
ORGLA03G0244100
Oryza glaberrima
ORGLA03G0244100
N
0.935
OPUNC03G24010
Oryza punctata
OPUNC03G24010
N
0.913
BGIOSGA013136
Oryza indica
BGIOSGA013136
N
0.843
OMERI03G23710
Oryza meridionalis
OMERI03G23710
N
0.838
OPUNC03G23990
Oryza punctata
OPUNC03G23990
N
0.813
ONIVA03G27270
Oryza nivara
ONIVA03G27270
N
0.783
LPERR03G21760
Leersia perrieri
LPERR03G21760
N
0.719