ORGLA04G0160200 (Oryza glaberrima)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORGLA04G0160200 T020478_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA04G0160200.1 B3 126 228

Links

Other B3 family TFs
Other Oryza glaberrima TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G36000 Arabidopsis thaliana AT2G36000 N
Bostr.23794s0495 Boechera stricta Bostr.23794s0495 N
Cagra.0993s0112 Capsella grandiflora Cagra.0993s0112 N
Carubv10023589m.g Capsella rubella Carubv10023589m.g N
fgenesh2_kg.4__1631__AT2G36000.1 Arabidopsis lyrata fgenesh2_kg.4__1631__AT2G36000.1 N
fgenesh2_kg.970__2__AT2G36000.1 Arabidopsis lyrata fgenesh2_kg.970__2__AT2G36000.1 N
Thhalv10016909m.g Eutrema salsugineum Thhalv10016909m.g N