CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10023589m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10023589m.g
T264669_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10023589m
mTERF
24
154
TLSRLRFHSFPALSFKPNTSSSSLFKSPDFTDFSSSTVSTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVKSVVDYMTTPPINFTLPDFRRLVSMCPELLTSPLNSHTIPVITFLLREVG
Carubv10023589m
mTERF
149
307
LLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVENKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYDPKLNYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHQACAAKGVRFPLPVMLKTNEAGFR
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0993s0112
Capsella grandiflora
Cagra.0993s0112
N
1.000
AT2G36000
Arabidopsis thaliana
AT2G36000
N
0.966
fgenesh2_kg.4__1631__AT2G36000.1
Arabidopsis lyrata
fgenesh2_kg.4__1631__AT2G36000.1
N
0.957
fgenesh2_kg.970__2__AT2G36000.1
Arabidopsis lyrata
fgenesh2_kg.970__2__AT2G36000.1
N
0.957
Bostr.23794s0495
Boechera stricta
Bostr.23794s0495
N
0.953
Thhalv10016909m.g
Eutrema salsugineum
Thhalv10016909m.g
N
0.894