POPTR_0005s16320 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0005s16320 T020858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s16320.1 B3 126 228

Links

Other B3 family TFs
Other Populus trichocarpa TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013833 Aptenodytes forsteri Afo_R013833 N 0.000
Cmyd_10008583 Chelonia mydas Cmyd_10008583 N 0.000
ENSLACG00000003287 Latimeria chalumnae ENSLACG00000003287 N 0.000
ENSPFOG00000000918 Poecilia formosa ENSPFOG00000000918 I 0.000
Gfo_R011707 Geospiza fortis Gfo_R011707 N 0.000
PRDM6 Callithrix jacchus ENSCJAG00000017318 I 0.000
PRDM6 Procavia capensis ENSPCAG00000007467 N 0.000
PRDM6 Taeniopygia guttata ENSTGUG00000001115 N 0.000
Tal_R005602 Tyto alba Tal_R005602 N 0.000