CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0009s10590
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0009s10590
T020877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0009s10590.1
B3
125
216
FVKPMLQSHVTGGFWLGLPVPFCKAHLPHYDEMITLEDENGDESETKYLAGKTGLSGGWRGFAIDHDLVDGDALVFQLVSPTKFKVYIVRAY
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018757
Oryza indica
BGIOSGA018757
I
0.000
Bo4g006930
Brassica oleracea
Bo4g006930
I
0.000
Bra004503
Brassica rapa
Bra004503
I
0.000
BRADI2G34670
Brachypodium distachyon
BRADI2G34670
I
0.000
CMK043C
Cyanidioschyzon merolae
CMK043C
I
0.000
EuGene.0400010070
Ostreococcus RCC809
EuGene.0400010070
I
0.000
e_gw1.06.00.251.1
Ostreococcus tauri
e_gw1.06.00.251.1
N
0.000
GRMZM2G115070
Zea mays
GRMZM2G115070
I
0.000
LPERR05G03900
Leersia perrieri
LPERR05G03900
I
0.000
OB05G14050
Oryza brachyantha
OB05G14050
I
0.000
OBART05G04360
Oryza barthii
OBART05G04360
I
0.000
OBART05G04370
Oryza barthii
OBART05G04370
I
0.000
OGLUM05G04280
Oryza glumaepatula
OGLUM05G04280
I
0.000
OMERI05G04320
Oryza meridionalis
OMERI05G04320
I
0.000
ONIVA05G04710
Oryza nivara
ONIVA05G04710
I
0.000
ORUFI05G04560
Oryza rufipogon
ORUFI05G04560
I
0.000
OS05G0162800
Oryza sativa
OS05G0162800
I
0.000
Pavir.Ab02717
Panicum virgatum
Pavir.Ab02717
I
0.000
Pavir.J12412
Panicum virgatum
Pavir.J12412
N
0.000
POPTR_0012s03530
Populus trichocarpa
POPTR_0012s03530
I
0.000
POPTR_0015s05430
Populus trichocarpa
POPTR_0015s05430
I
0.000
SapurV1A.0074s0170
Salix purpurea
SapurV1A.0074s0170
I
0.000
SapurV1A.0202s0430
Salix purpurea
SapurV1A.0202s0430
I
0.000
Sb01g012460
Sorghum bicolor
Sb01g012460
I
0.000
Si038786m.g
Setaria italica
Si038786m.g
I
0.000