CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0009s10600
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0009s10600
T020878_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0009s10600.1
B3
125
216
FLKPMVQSHVSGCFWLGLPVYFCKSHLPLSDEMMTLEDENGDEFQTKYLAQKTGLSGGWRGFSIDHELVDGDALVFQLVSPTRFKVYIARAY
POPTR_0009s10600.2
B3
125
216
FLKPMVQSHVSGCFWLGLPVYFCKSHLPLSDEMMTLEDENGDEFQTKYLAQKTGLSGGWRGFSIDHELVDGDALVFQLVSPTRFKVYIARAY
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_05009
Ascaris suum
ASU_05009
N
0.000
Bm7640
Brugia malayi
Bm7640
N
0.000
dve-1
Caenorhabditis elegans
WBGene00022861
N
0.000
EEL_0000412901
Elaeophora elaphi
EEL_0000412901
N
0.000
EVEC_0001166801
Enterobius vermicularis
EVEC_0001166801
N
0.000
Hba_21527
Heterorhabditis bacteriophora
Hba_21527
N
0.000
HPBE_0001810001
Heligmosomoides bakeri
HPBE_0001810001
N
0.000
L596_g9224
Steinernema carpocapsae
L596_g9224
N
0.000
L889_g25145
Steinernema feltiae
L889_g25145
N
0.000
L892_g9710
Steinernema scapterisci
L892_g9710
N
0.000
L898_g34810
Steinernema monticolum
L898_g34810
N
0.000
LOAG_03092
Loa loa
LOAG_03092
N
0.000
nAv.1.0.1.g04870
Acanthocheilonema viteae
nAv.1.0.1.g04870
N
0.000
nDi.2.2.2.g01589
Dirofilaria immitis
nDi.2.2.2.g01589
N
0.000
nOo.2.0.1.g00722
Onchocerca ochengi
nOo.2.0.1.g00722
N
0.000
RSKR_0001108600
Rhabditophanes kr3021
RSKR_0001108600
N
0.000
SMUV_0000944701
Syphacia muris
SMUV_0000944701
N
0.000
SPAL_0000744000
Strongyloides papillosus
SPAL_0000744000
N
0.000
SSTP_0001191000
Strongyloides stercoralis
SSTP_0001191000
N
0.000
SVE_1021200
Strongyloides venezuelensis
SVE_1021200
N
0.000
TCLT_0000625901
Thelazia callipaeda
TCLT_0000625901
N
0.000
WBGene00239750
Onchocerca volvulus
WBGene00239750
N
0.000
WUBG_04888
Wuchereria bancrofti
WUBG_04888
N
0.000