Cagra.3807s0032 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.3807s0032 T022791_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM1
M00853_2.00 		Arabidopsis thaliana
WGDTGTAGN
NCTACAHCW		 PBM
Franco-Zorrilla et al.(2014)
REM1 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3807s0032.1.p B3 17 92
Cagra.3807s0032.1.p B3 204 301
Cagra.3807s0032.1.p B3 327 427

Links

Other B3 family TFs
Other Capsella grandiflora TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7867s1015 Boechera stricta Bostr.7867s1015 I 0.878
Carubv10006696m.g Capsella rubella Carubv10006696m.g I 0.963
REM1 Arabidopsis thaliana AT4G31610 D 0.787