CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_002_01194
(
Aquilegia coerulea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Aquca_002_01194
T024817_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_01194.1
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.2
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.3
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.4
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Aquilegia coerulea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022010
Oryza indica
BGIOSGA022010
N
Bra003405
Brassica rapa
Bra003405
I
BRADI1G49980
Brachypodium distachyon
BRADI1G49980
N
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
GRMZM2G118690
Zea mays
GRMZM2G118690
N
LPERR06G01660
Leersia perrieri
LPERR06G01660
N
MLOC_15776
Hordeum vulgare
MLOC_15776
N
OB06G11850
Oryza brachyantha
OB06G11850
N
OGLUM06G01860
Oryza glumaepatula
OGLUM06G01860
N
OLONG_020703
Oryza longistaminata
OLONG_020703
N
OMERI06G01780
Oryza meridionalis
OMERI06G01780
N
ONIVA06G02210
Oryza nivara
ONIVA06G02210
N
OPUNC06G01720
Oryza punctata
OPUNC06G01720
N
ORGLA06G0019100
Oryza glaberrima
ORGLA06G0019100
N
ORUFI06G01870
Oryza rufipogon
ORUFI06G01870
N
OS06G0130600
Oryza sativa
OS06G0130600
N
Pavir.Db02349
Panicum virgatum
Pavir.Db02349
N
Pavir.J00934
Panicum virgatum
Pavir.J00934
N
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Sb10g002020
Sorghum bicolor
Sb10g002020
N
Si006972m.g
Setaria italica
Si006972m.g
N
Traes_4AL_A02408BC8
Triticum aestivum
Traes_4AL_A02408BC8
N
Traes_7DS_FE8BC1125
Triticum aestivum
Traes_7DS_FE8BC1125
N
TRIUR3_11677
Triticum urartu
TRIUR3_11677
N