CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_029364.2
(
Lotus japonicus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
LjSGA_029364.2
T024923_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_029364.2
BBR
1
288
MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSTMPEKPMFGGRNAAVLSGANGAFHNHHHRDIGMPQAATYPMEYMRDAWISSQRDKYMHMIPTNPSFGGIPETSTAHHIQMIPPPELTKEESPIDEAVAPVAEKVKGTGKKRQGPKLPKSPKAKKPKRGPHLPKDENAASVQRARVPKKTAEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCRTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Lotus japonicus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
Ca_22170
Cicer arietinum
Ca_22170
N
0.807
GLYMA07G12150
Glycine max
GLYMA07G12150
N
0.823
GLYMA07G12160
Glycine max
GLYMA07G12160
N
0.860
GLYMA09G30040
Glycine max
GLYMA09G30040
N
0.838
GLYMA09G30050
Glycine max
GLYMA09G30050
N
0.838
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.881
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.859
VIT_17s0000g01860
Vitis vinifera
VIT_17s0000g01860
N
0.733