ENSLOCG00000017415 (Lepisosteus oculatus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSLOCG00000017415 T026058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBED1
M02771_2.00 		Homo sapiens
HTRTCGCGACATR
YATGTCGCGAYAD		 SELEX
Jolma et al.(2013)
ZBED1_1 		0.977 0.977
ZBED1
M04056_2.00 		Homo sapiens
VTRTCGCGAYAT
ATRTCGCGAYAB		 SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX 		0.977 0.977
ZBED1
M09776_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DREF_01 		0.977 0.977
ZBED1
M04057_2.00 		Homo sapiens
MTRTCGCGAYAK
MTRTCGCGAYAK		 SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX 		0.977 0.977
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000021520 BED ZF 23 72

Links

Other BED ZF family TFs
Other Lepisosteus oculatus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000001757 Poecilia formosa ENSPFOG00000001757 I
znf740a Gasterosteus aculeatus ENSGACG00000000608 N