CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM12G18520
(
Oryza glumaepatula
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OGLUM12G18520
T027086_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G18520.1
BED ZF
101
146
SPVWEHMEKDQPSKDMATCIHCSNVYTAKSTNGTSHLRRHLTSKCL
Links
Other
BED ZF
family TFs
Other
Oryza glumaepatula
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037670
Oryza indica
BGIOSGA037670
N
0.955
OBART12G16870
Oryza barthii
OBART12G16870
N
0.955
ONIVA12G15210
Oryza nivara
ONIVA12G15210
N
0.955
ORGLA12G0202400
Oryza glaberrima
ORGLA12G0202400
N
0.773
ORUFI12G18730
Oryza rufipogon
ORUFI12G18730
N
0.955