CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA12G0202400
(
Oryza glaberrima
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ORGLA12G0202400
T027159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA12G0202400.1
BED ZF
108
145
KDQPSKDMATCVHCSKVYTAKSTNGTSHLRRHLTSKCL
Links
Other
BED ZF
family TFs
Other
Oryza glaberrima
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037670
Oryza indica
BGIOSGA037670
N
0.818
OBART12G16870
Oryza barthii
OBART12G16870
N
0.818
ONIVA12G15210
Oryza nivara
ONIVA12G15210
N
0.818
ORUFI12G18730
Oryza rufipogon
ORUFI12G18730
N
0.818
OGLUM12G18520
Oryza glumaepatula
OGLUM12G18520
N
0.773