Pavir.J14148 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J14148 T028575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J14148.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022090 Oryza indica BGIOSGA022090 N
BRADI1G52000 Brachypodium distachyon BRADI1G52000 N
GRMZM2G027253 Zea mays GRMZM2G027253 N
GRMZM2G405170 Zea mays GRMZM2G405170 N
LPERR06G00460 Leersia perrieri LPERR06G00460 N
MLOC_19134 Hordeum vulgare MLOC_19134 N
OB06G10550 Oryza brachyantha OB06G10550 N
OBART03G25130 Oryza barthii OBART03G25130 N
OGLUM06G00440 Oryza glumaepatula OGLUM06G00440 N
OLONG_004734 Oryza longistaminata OLONG_004734 N
OMERI06G00450 Oryza meridionalis OMERI06G00450 N
ONIVA06G00500 Oryza nivara ONIVA06G00500 N
OPUNC06G00440 Oryza punctata OPUNC06G00440 N
ORGLA06G0005000 Oryza glaberrima ORGLA06G0005000 N
ORUFI06G00530 Oryza rufipogon ORUFI06G00530 N
OS06G0107800 Oryza sativa OS06G0107800 N
Pavir.Da02442 Panicum virgatum Pavir.Da02442 N
Pavir.Db02478 Panicum virgatum Pavir.Db02478 N
Sb10g000780 Sorghum bicolor Sb10g000780 N
Si008509m.g Setaria italica Si008509m.g N
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N