CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra028443
(
Brassica rapa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bra028443
T031511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra028443.1-P
bHLH
18
60
DQIIDLVTKLREILPEIGQRRRSDKVSASKVLQETCNYIRNLN
Links
Other
bHLH
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g146500
Brassica oleracea
Bo2g146500
N
0.842
Bo6g063200
Brassica oleracea
Bo6g063200
N
0.914
Bo7g086990
Brassica oleracea
Bo7g086990
N
0.842
Bo9g008670
Brassica oleracea
Bo9g008670
N
0.842
Bostr.10058s0009
Boechera stricta
Bostr.10058s0009
N
0.845
Bra025358
Brassica rapa
Bra025358
N
0.843
Bra033063
Brassica rapa
Bra033063
N
0.842
Gorai.005G139900
Gossypium raimondii
Gorai.005G139900
N
0.840
PRE1
Arabidopsis thaliana
AT5G39860
N
0.876
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.913
PRE5
Arabidopsis thaliana
AT3G28857
N
0.842
scaffold_500871.1
Arabidopsis lyrata
scaffold_500871.1
N
0.842
Thhalv10005197m.g
Eutrema salsugineum
Thhalv10005197m.g
N
0.842
Thhalv10028074m.g
Eutrema salsugineum
Thhalv10028074m.g
N
0.913