CGI_10026909 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10026909 T032148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.903 0.885
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.903 0.885
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.903 0.885
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.903 0.885
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.903 0.885
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.903 0.885
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.903 0.885
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.903 0.885
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.903 0.885
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.903 0.885
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.903 0.885
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.903 0.885
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.903 0.885
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.903 0.885
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.903 0.885
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.903 0.885
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.903 0.885
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.903 0.885
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.843 0.827
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.843 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC37625 bHLH 47 98

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003006 Acyrthosiphon pisum ACYPI003006 I 0.854
AGAP010201 Anopheles gambiae AGAP010201 I 0.873
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.903
BGIBMGA010353 Bombyx mori BGIBMGA010353 I 0.843
CapteG45346 Capitella teleta CapteG45346 I 0.903
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.903
crp Drosophila melanogaster FBgn0001994 D 0.843
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.903
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I 0.879
ENSCING00000014406 Ciona intestinalis ENSCING00000014406 I 0.901
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.903
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I 0.901
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.903
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I 0.903
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I 0.912
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.903
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.903
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.903
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.903
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.903
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.903
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I 0.903
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I 0.901
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.903
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.903
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.903
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.903
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I 0.901
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I 0.903
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.903
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.903
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.903
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.903
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.903
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I 0.903
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I 0.901
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I 0.903
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I 0.903
GA20511 Drosophila pseudoobscura FBgn0080505 I 0.843
GB48999 Apis mellifera GB48999 I 0.873
GD21926 Drosophila simulans FBgn0193342 I 0.843
GE19372 Drosophila yakuba FBgn0236717 I 0.843
GF21721 Drosophila ananassae FBgn0098721 I 0.843
GG24179 Drosophila erecta FBgn0116312 I 0.843
GH10096 Drosophila grimshawi FBgn0117577 I 0.843
GI14377 Drosophila mojavensis FBgn0137129 I 0.843
GJ16254 Drosophila virilis FBgn0203439 I 0.843
GK24289 Drosophila willistoni FBgn0226250 I 0.843
GL14101 Drosophila persimilis FBgn0151706 I 0.843
GM17917 Drosophila sechellia FBgn0172824 I 0.843
HMEL008759 Heliconius melpomene HMEL008759 I 0.843
KGM_15765 Danaus plexippus KGM_15765 I 0.843
L798_07621 Zootermopsis nevadensis L798_07621 I 0.873
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.873
MDOA012071 Musca domestica MDOA012071 I 0.854
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.903
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.903
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.903
Sakowv30040946m.g Saccoglossus kowalevskii Sakowv30040946m.g I 0.892
SPU_003179 Strongylocentrotus purpuratus SPU_003179 I 0.841
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I 0.846
tetur30g00270 Tetranychus urticae tetur30g00270 I 0.849
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.903
TFAP4 Bos taurus ENSBTAG00000033174 I 0.903
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.903
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.903
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.903
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.903
tfap4 Oryzias latipes ENSORLG00000008286 I 0.903
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.903
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I 0.882
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.903
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.903
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.903
tfap4 Gasterosteus aculeatus ENSGACG00000011329 I 0.883
Tfap4 Mus musculus ENSMUSG00000005718 D 0.903
TFAP4 Homo sapiens ENSG00000090447 D 0.903
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.903
TFAP4 Felis catus ENSFCAG00000011227 I 0.903
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.903
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.903
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.903
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.903
TFAP4 Equus caballus ENSECAG00000022311 I 0.903
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.903
tfap4 Oryzias latipes ENSORLG00000015050 I 0.901
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.903
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.903
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.903
tfap4 Danio rerio ENSDARG00000103923 I 0.903
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.903
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.903
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.903
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I 0.901
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I 0.903
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I 0.901
tfap4 Takifugu rubripes ENSTRUG00000006111 I 0.903
tfap4 Takifugu rubripes ENSTRUG00000013344 I 0.901
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.903
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.903