CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_07895
(
Colletotrichum higginsianum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CH063_07895
T032161_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.889
0.909
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.884
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF36296
bHLH
64
138
KKTAHNMIEKRYRTNLNDKIAALRDSVPSLRIMSKSARGEDTTEDREELHGLTPAHKLNKATVLSKATEYIRHLE
Links
Other
bHLH
family TFs
Other
Colletotrichum higginsianum
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g031620
Brassica oleracea
Bo7g031620
N
Bostr.19424s0134
Boechera stricta
Bostr.19424s0134
N
Bra015090
Brassica rapa
Bra015090
N
Cagra.5961s0001
Capsella grandiflora
Cagra.5961s0001
N
Carubv10014242m.g
Capsella rubella
Carubv10014242m.g
N
fgenesh2_kg.3__2704__AT3G24860.1
Arabidopsis lyrata
fgenesh2_kg.3__2704__AT3G24860.1
N
Thhalv10002843m.g
Eutrema salsugineum
Thhalv10002843m.g
N