CJA08920 (Caenorhabditis japonica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CJA08920 T032192_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mdl-1
M08183_2.00 		Caenorhabditis elegans
CACGTGAY
RTCACGTG		 ChIP-seq
Contrino et al.(2012)
Mw156 		0.914 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA08920 bHLH 94 146

Links

Other bHLH family TFs
Other Caenorhabditis japonica TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006277 Oryza indica BGIOSGA006277 N
BGIOSGA022378 Oryza indica BGIOSGA022378 N
BGIOSGA037035 Oryza indica BGIOSGA037035 N
BRADI1G48350 Brachypodium distachyon BRADI1G48350 N
BRADI3G45470 Brachypodium distachyon BRADI3G45470 N
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N
GRMZM2G034868 Zea mays GRMZM2G034868 N
GRMZM2G043250 Zea mays GRMZM2G043250 N
GRMZM2G048987 Zea mays GRMZM2G048987 N
MLOC_13034 Hordeum vulgare MLOC_13034 N
MLOC_43316 Hordeum vulgare MLOC_43316 N
MLOC_62808 Hordeum vulgare MLOC_62808 N
OB02G27690 Oryza brachyantha OB02G27690 N
OB06G14070 Oryza brachyantha OB06G14070 N
OB12G13670 Oryza brachyantha OB12G13670 N
OLONG_000187 Oryza longistaminata OLONG_000187 N
OLONG_014957 Oryza longistaminata OLONG_014957 N
ONIVA02G22250 Oryza nivara ONIVA02G22250 N
ONIVA06G05610 Oryza nivara ONIVA06G05610 N
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N
OS02G0550900 Oryza sativa OS02G0550900 N
OS12G0160900 Oryza sativa OS12G0160900 N
Pavir.Aa01718 Panicum virgatum Pavir.Aa01718 N
Pavir.Ab01899 Panicum virgatum Pavir.Ab01899 N
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N
Pavir.Bb02863 Panicum virgatum Pavir.Bb02863 N
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N
PDK_20s1320921g004 Phoenix dactylifera PDK_20s1320921g004 N
Sb02g034560 Sorghum bicolor Sb02g034560 N
Sb04g022400 Sorghum bicolor Sb04g022400 N
Sb08g003780 Sorghum bicolor Sb08g003780 N
Si009370m.g Setaria italica Si009370m.g N
Si016477m.g Setaria italica Si016477m.g N
Si029002m.g Setaria italica Si029002m.g N
Traes_4AL_8B3A3CC2F Triticum aestivum Traes_4AL_8B3A3CC2F N
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N
Traes_7DS_016F8E2EA Triticum aestivum Traes_7DS_016F8E2EA N
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N
TRIUR3_03719 Triticum urartu TRIUR3_03719 N
TRIUR3_25143 Triticum urartu TRIUR3_25143 N