CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000025039
(
Astyanax mexicanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSAMXG00000025039
T032952_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.883
0.904
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.883
0.904
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.883
0.904
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.883
0.904
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.883
0.904
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.883
0.885
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.879
0.865
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.879
0.865
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.879
0.865
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.879
0.865
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.879
0.865
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.879
0.865
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.879
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000025745
bHLH
118
169
QRVIANVRERQRTQSLNDAFASLRKIIPTLPSDKLSKIQILKLASRYIDFLY
Links
Other
bHLH
family TFs
Other
Astyanax mexicanus
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_00594
Capronia coronata
A1O1_00594
I
A1O5_08185
Cladophialophora psammophila
A1O5_08185
N
ATEG_08244
Aspergillus terreus
CADATEAG00003887
N
BDDG_05568
Blastomyces dermatitidis
BDDG_05568
N
CGGC5_8784
Colletotrichum gloeosporioides
CGGC5_8784
I
CLUG_01645
Clavispora lusitaniae
CLUG_01645
N
CLUG_01645
Candida lusitaniae
CLUG_01645
N
DOTSEDRAFT_71818
Dothistroma septosporum
DOTSEDRAFT_71818
N
fgenesh1_pg.C_chr_6.1000096
Pichia stipitis
fgenesh1_pg.C_chr_6.1000096
I
fgenesh1_pm.00168_#_452
Aspergillus carbonarius
fgenesh1_pm.00168_#_452
I
GMDG_04293
Pseudogymnoascus destructans
GMDG_04293
I
HCBG_03369
Histoplasma capsulatum
HCBG_03369
N
HMPREF1120_08148
Exophiala dermatitidis
HMPREF1120_08148
I
HMPREF1541_03778
Cyphellophora europaea
HMPREF1541_03778
I
HPODL_04541
Ogataea parapolymorpha
HPODL_04541
N
KUCA_T00002773001
Kuraishia capsulata
KUCA_T00002773001
I
Kwal_6732
Kluyveromyces waltii
Kwal_6732
I
LELG_02863
Lodderomyces elongisporus
LELG_02863
N
M438DRAFT_64434
Aureobasidium pullulans
M438DRAFT_64434
I
MBM_00253
Marssonina brunnea
MBM_00253
I
MPH_01921
Macrophomina phaseolina
MPH_01921
I
PAAG_02753
Paracoccidioides sp lutzii
PAAG_02753
N
PABG_03226
Paracoccidioides brasiliensis
PABG_03226
N
Pc12g02800
Penicillium chrysogenum
Pc12g02800
N
PCH_Pc12g02800
Penicillium rubens
PCH_Pc12g02800
N
PDE_06431
Penicillium oxalicum
PDE_06431
N
PEX1_064660
Penicillium expansum
PEX1_064660
N
PICST_32615
Scheffersomyces stipitis
PICST_32615
I
PV05_03077
Exophiala xenobiotica
PV05_03077
I
PV06_08173
Exophiala oligosperma
PV06_08173
N
PV07_01234
Cladophialophora immunda
PV07_01234
I
PV07_04955
Cladophialophora immunda
PV07_04955
N
PV08_05182
Exophiala spinifera
PV08_05182
N
PV09_04421
Verruconis gallopava
PV09_04421
N
PV11_05379
Exophiala sideris
PV11_05379
N
SEPMUDRAFT_157964
Sphaerulina musiva
SEPMUDRAFT_157964
N
SNOG_09854
Stagonospora nodorum
SNOG_09854
I
SNOG_09854
Phaeosphaeria nodorum
SNOG_09854
I
SPAPADRAFT_61965
Spathaspora passalidarum
SPAPADRAFT_61965
N
SPOG_02829
Schizosaccharomyces cryophilus
SPOG_02829
I
TRIVIDRAFT_217692
Trichoderma virens
TRIVIDRAFT_217692
N
V499_04479
Pseudogymnoascus pannorum
V499_04479
N
VHEMI02171
Torrubiella hemipterigena
VHEMI02171
I
VHEMI02369
Torrubiella hemipterigena
VHEMI02369
N
Z518_07506
Rhinocladiella mackenziei
Z518_07506
N
Z519_01437
Cladophialophora bantiana
Z519_01437
I
Z519_09408
Cladophialophora bantiana
Z519_09408
N