TFEC (Callithrix jacchus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCJAG00000005199 T033317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFEC
M02778_2.00 		Homo sapiens
RNCACRTGAB
VTCAYGTGNY		 SELEX
Jolma et al.(2013)
TFEC_1 		0.914 1.000
TFEC
M04078_2.00 		Homo sapiens
NVCACGTGACN
NGTCACGTGBN		 SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX 		0.914 1.000
TFEC
M04079_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tfec
M00755_2.00 		Mus musculus
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2013)
pTH2885 		0.914 0.981
Tfec
M01736_2.00 		Mus musculus
NCNCRTGVYN
NRBCAYGNGN		 PBM
Weirauch et al.(2014)
pTH5065 		0.914 0.981
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.870 0.907
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.870 0.907
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.870 0.907
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.870 0.907
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.870 0.907
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.870 0.907
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.870 0.907
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.870 0.889
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.870 0.889
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.870 0.889
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.870 0.889
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000009505 bHLH 139 192
ENSCJAP00000009516 bHLH 227 280
ENSCJAP00000045473 bHLH 110 163

Links

Other bHLH family TFs
Other Callithrix jacchus TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29883.m001988 Ricinus communis 29883.m001988 N
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N
BGIOSGA028855 Oryza indica BGIOSGA028855 N
BRADI3G38360 Brachypodium distachyon BRADI3G38360 N
BRADI4G32470 Brachypodium distachyon BRADI4G32470 N
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N
Ca_03755 Cicer arietinum Ca_03755 N
Ca_07790 Cicer arietinum Ca_07790 N
Ca_12194 Cicer arietinum Ca_12194 N
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N
Cla011475 Citrullus lanatus Cla011475 N
Cla015040 Citrullus lanatus Cla015040 N
Cucsa.289090 Cucumis sativus Cucsa.289090 N
Cucsa.388780 Cucumis sativus Cucsa.388780 N
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N
F775_02130 Aegilops tauschii F775_02130 N
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N
GLYMA02G16110 Glycine max GLYMA02G16110 N
GLYMA03G31510 Glycine max GLYMA03G31510 N
GLYMA10G03690 Glycine max GLYMA10G03690 N
GLYMA10G30430 Glycine max GLYMA10G30430 N
GLYMA19G34360 Glycine max GLYMA19G34360 N
GLYMA20G36770 Glycine max GLYMA20G36770 N
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N
GRMZM2G082630 Zea mays GRMZM2G082630 N
GRMZM2G113257 Zea mays GRMZM2G113257 N
GRMZM2G145146 Zea mays GRMZM2G145146 N
LPERR01G07000 Leersia perrieri LPERR01G07000 I
LPERR08G15030 Leersia perrieri LPERR08G15030 N
MDP0000176749 Malus domestica MDP0000176749 N
MDP0000295593 Malus domestica MDP0000295593 N
mgf022146m Mimulus guttatus mgf022146m N
MLOC_2366 Hordeum vulgare MLOC_2366 N
MLOC_70640 Hordeum vulgare MLOC_70640 N
MTR_1g070870 Medicago truncatula MTR_1g070870 N
MTR_1g080890 Medicago truncatula MTR_1g080890 N
OB08G25230 Oryza brachyantha OB08G25230 N
OBART09G13210 Oryza barthii OBART09G13210 N
OGLUM08G19000 Oryza glumaepatula OGLUM08G19000 N
OGLUM09G13640 Oryza glumaepatula OGLUM09G13640 N
OMERI06G24090 Oryza meridionalis OMERI06G24090 I
OMERI09G10230 Oryza meridionalis OMERI09G10230 N
ONIVA08G20180 Oryza nivara ONIVA08G20180 N
ONIVA09G13640 Oryza nivara ONIVA09G13640 N
OPUNC08G16020 Oryza punctata OPUNC08G16020 N
OPUNC09G11520 Oryza punctata OPUNC09G11520 I
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N
ORGLA08G0157100 Oryza glaberrima ORGLA08G0157100 N
ORUFI08G20260 Oryza rufipogon ORUFI08G20260 N
ORUFI09G14130 Oryza rufipogon ORUFI09G14130 N
OS08G0477900 Oryza sativa OS08G0477900 N
Pavir.Ba01985 Panicum virgatum Pavir.Ba01985 N
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N
Pavir.J16121 Panicum virgatum Pavir.J16121 N
Pavir.J25149 Panicum virgatum Pavir.J25149 N
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N
PK20184.1 Cannabis sativa PK20184.1 N
PK25419.1 Cannabis sativa PK25419.1 N
Pm003525 Prunus mume Pm003525 N
Pm020229 Prunus mume Pm020229 N
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N
Sb02g026920 Sorghum bicolor Sb02g026920 N
Sb07g023280 Sorghum bicolor Sb07g023280 N
Si014356m.g Setaria italica Si014356m.g N
Si033077m.g Setaria italica Si033077m.g N
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N
TCM_004217 Theobroma cacao TCM_004217 N
TCM_026346 Theobroma cacao TCM_026346 N
Traes_2AL_7A37B5232 Triticum aestivum Traes_2AL_7A37B5232 N
Traes_2BL_649181D92 Triticum aestivum Traes_2BL_649181D92 N
Traes_2DL_5F0BD9D6F Triticum aestivum Traes_2DL_5F0BD9D6F N
Traes_5BL_553BE31FE Triticum aestivum Traes_5BL_553BE31FE N
TRIUR3_09991 Triticum urartu TRIUR3_09991 N
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N