CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

usf1 *(Danio rerio)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSDARG00000041689	T033688_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSDARP00000002107	bHLH	199	254	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQSKGGILSKACDYIQELR
ENSDARP00000114463	bHLH	197	224	RRAQHNEVERRRRDKINNWIVQLSKTIP
ENSDARP00000116327	bHLH	199	236	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTG
ENSDARP00000117904	bHLH	186	213	RRAQHNEVERRRRDKINNWIVQLSKTIP
ENSDARP00000118512	bHLH	189	227	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQ
ENSDARP00000119234	bHLH	178	205	RRAQHNEVERRRRDKINNWIVQLSKTIP
ENSDARP00000122834	bHLH	120	175	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQSKGGILSKACDYIQELR
ENSDARP00000123553	bHLH	187	242	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQSKGGILSKACDYIQELR
ENSDARP00000139344	bHLH	199	256	RRAQHNEVERRRRDKINNWIVQLSKTIPDCTIDSTKTGQACSKGGILSKACDYIQELR

Links
Other bHLH family TFs
Other *Danio rerio* TFs