ascl1b (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000101628 T033745_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.859 0.920
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.859 0.920
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.859 0.920
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.859 0.920
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.859 0.920
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.859 0.920
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.859 0.920
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.859 0.920
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.859 0.920
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000022655 bHLH 69 119

Links

Other bHLH family TFs
Other Danio rerio TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019668 Ailuropoda melanoleuca ENSAMEG00000019668 N
ENSCSAG00000018910 Chlorocebus sabaeus ENSCSAG00000018910 N
ENSDORG00000005705 Dipodomys ordii ENSDORG00000005705 N
ENSMPUG00000019344 Mustela putorius furo ENSMPUG00000019344 N
ENSNLEG00000004569 Nomascus leucogenys ENSNLEG00000004569 N
ENSOARG00000015487 Ovis aries ENSOARG00000015487 N
ENSP00000372635 Macaca fascicularis ENSP00000372635 N
ENSP00000406955-D1 Bos grunniens ENSP00000406955-D1 N
ENSPANG00000018989 Papio anubis ENSPANG00000018989 N
ENSSSCG00000021674 Sus scrofa ENSSSCG00000021674 N
ENSSTOG00000025333 Ictidomys tridecemlineatus ENSSTOG00000025333 N
ENSTSYG00000009951 Tarsius syrichta ENSTSYG00000009951 N
Myotis_brandtii_ZBTB38_10028248 Myotis brandtii Myotis_brandtii_ZBTB38_10028248 N
Zbtb38 Rattus norvegicus ENSRNOG00000012386 N
ZBTB38 Canis familiaris ENSCAFG00000007664 N
ZBTB38 Callithrix jacchus ENSCJAG00000031471 N
ZBTB38 Dasypus novemcinctus ENSDNOG00000037832 N
ZBTB38 Vicugna pacos ENSVPAG00000007353 N
ZBTB38 Erinaceus europaeus ENSEEUG00000000264 N
ZBTB38 Felis catus ENSFCAG00000030922 N
ZBTB38 Sus scrofa ENSSSCG00000022073 N
ZBTB38 Homo sapiens ENSG00000177311 N
Zbtb38 Mus musculus ENSMUSG00000040433 N
ZBTB38 Pteropus vampyrus ENSPVAG00000017499 N
ZBTB38 Pan troglodytes ENSPTRG00000030108 N
ZBTB38 Gorilla gorilla ENSGGOG00000023008 N
ZBTB38 Ochotona princeps ENSOPRG00000009539 N
ZBTB38 Otolemur garnettii ENSOGAG00000009394 N
ZBTB38 Myotis lucifugus ENSMLUG00000012512 N
ZBTB38 Macaca mulatta ENSMMUG00000031526 N