FERD3L (Erinaceus europaeus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSEEUG00000004309 T033997_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 1.000
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 1.000
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 1.000
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 1.000
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000003886 bHLH 100 152

Links

Other bHLH family TFs
Other Erinaceus europaeus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g030140 Brassica oleracea Bo3g030140 I 0.000
Bo4g034600 Brassica oleracea Bo4g034600 I 0.000
Bo4g186300 Brassica oleracea Bo4g186300 I 0.000
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.000
Bra017235 Brassica rapa Bra017235 I 0.000
Bra023070 Brassica rapa Bra023070 I 0.000
Cagra.0228s0035 Capsella grandiflora Cagra.0228s0035 I 0.000
Carubv10024954m.g Capsella rubella Carubv10024954m.g I 0.000
HRD Arabidopsis lyrata scaffold_402264.1 I 0.000
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.000
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.000
Thhalv10017537m.g Eutrema salsugineum Thhalv10017537m.g I 0.000