HIF1A (Gallus gallus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGALG00000011870 T034513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.857 0.887
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.857 0.887
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.857 0.887
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.857 0.887
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.857 0.887
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.857 0.887
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.857 0.887
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.857 0.887
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.857 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000019338 bHLH 18 70

Links

Other bHLH family TFs
Other Gallus gallus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020074 Oryza indica BGIOSGA020074 N
GRMZM2G037286 Zea mays GRMZM2G037286 N
OGLUM05G21920 Oryza glumaepatula OGLUM05G21920 N
OMERI05G18690 Oryza meridionalis OMERI05G18690 N
ONIVA05G21490 Oryza nivara ONIVA05G21490 N
OPUNC05G18380 Oryza punctata OPUNC05G18380 N
ORGLA05G0180800 Oryza glaberrima ORGLA05G0180800 N
ORUFI05G21990 Oryza rufipogon ORUFI05G21990 N
OS05G0485400 Oryza sativa OS05G0485400 N
Pavir.J06020 Panicum virgatum Pavir.J06020 N
Sb09g023750 Sorghum bicolor Sb09g023750 N
Si021890m.g Setaria italica Si021890m.g N