Hif1a (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000021109 T035677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hif1a
M08750_2.00		 Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.914 1.000
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.914 1.000
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.914 1.000
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.914 1.000
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.914 1.000
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.914 1.000
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.914 1.000
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000106091 bHLH 18 69

Links

Other bHLH family TFs
Other Mus musculus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.000
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.000
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.000
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.000
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.000
GRMZM2G303463 Zea mays GRMZM2G303463 I 0.000
GSMUA_Achr1G08130_001 Musa acuminata GSMUA_Achr1G08130_001 N 0.000
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.000
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.000
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.000
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.000
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.000
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.000
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.000
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.000
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.000
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.000
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.000
OS08G0543700 Oryza sativa OS08G0543700 I 0.000
OS09G0519100 Oryza sativa OS09G0519100 I 0.000
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.000
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.000
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.000
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.000
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.000
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.000
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.000
Si015513m.g Setaria italica Si015513m.g I 0.000
Si031900m.g Setaria italica Si031900m.g I 0.000
Si032741m.g Setaria italica Si032741m.g I 0.000