CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATOH1
(
Ochotona princeps
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOPRG00000008973
T036339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN
NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.914
1.000
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY
RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.914
1.000
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY
RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.914
1.000
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.914
1.000
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.914
1.000
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.914
1.000
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.914
1.000
ATOH1
M09877_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.914
1.000
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY
RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.914
1.000
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000008195
bHLH
157
209
RRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALS
Links
Other
bHLH
family TFs
Other
Ochotona princeps
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000283
Ailuropoda melanoleuca
ENSAMEG00000000283
I
ENSCSAG00000018675
Chlorocebus sabaeus
ENSCSAG00000018675
I
ENSMPUG00000001216
Mustela putorius furo
ENSMPUG00000001216
I
ENSPANG00000017142
Papio anubis
ENSPANG00000017142
I
ENSPPYG00000010750
Pongo abelii
ENSPPYG00000010750
I
INSM1
Bos taurus
ENSBTAG00000045526
I
INSM1
Canis familiaris
ENSCAFG00000005264
I
INSM1
Dasypus novemcinctus
ENSDNOG00000033318
I
INSM1
Homo sapiens
ENSG00000173404
D
Insm1
Mus musculus
ENSMUSG00000068154
D
INSM1
Otolemur garnettii
ENSOGAG00000034802
I
INSM1
Pan troglodytes
ENSPTRG00000013303
I
INSM1
Sus scrofa
ENSSSCG00000007106
I