CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000015935
(
Sarcophilus harrisii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSHAG00000015935
T037367_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB
VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.914
1.000
TCF12
M04137_2.00
Homo sapiens
VCACSTGB
VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.914
1.000
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.914
1.000
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.914
1.000
TCF12
M07806_2.00
Homo sapiens
VCASCTGB
VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.914
1.000
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH
DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.914
1.000
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH
DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.914
1.000
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB
VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.914
1.000
TCF12
M09858_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.914
1.000
TCF12
M09859_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.914
1.000
TCF12
M09860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.914
1.000
TCF12
M09861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.914
1.000
TCF12
M09862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.914
1.000
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN
NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.914
1.000
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN
NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.914
0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB
VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.914
0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB
VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.914
0.885
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN
NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.912
0.962
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN
NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.912
0.962
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN
NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.912
0.962
TCF4
M02728_2.00
Homo sapiens
RCACCTG
CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.912
0.962
TCF4
M04214_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.912
0.962
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB
VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.912
0.962
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.912
0.962
TCF4
M04215_2.00
Homo sapiens
VCACCTGN
NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.912
0.962
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS
SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886
0.962
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN
NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886
0.962
Tcf3
M09886_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886
0.962
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886
0.923
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886
0.923
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886
0.923
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886
0.923
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886
0.923
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886
0.923
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000018774
bHLH
578
631
RRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLE
Links
Other
bHLH
family TFs
Other
Sarcophilus harrisii
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003097
Aedes aegypti
AAEL003097
N
AALB004109
Anopheles albimanus
AALB004109
N
Aan_R005984
Calypte anna
Aan_R005984
N
AARA007796
Anopheles arabiensis
AARA007796
N
AATE013496
Anopheles atroparvus
AATE013496
N
ACEP21389
Atta cephalotes
ACEP21389
N
ACHR000042
Anopheles christyi
ACHR000042
N
ACOM025306
Anopheles coluzzii
ACOM025306
N
ACYPI47146
Acyrthosiphon pisum
ACYPI47146
N
ADAC004139
Anopheles darlingi
ADAC004139
N
Afo_R003276
Aptenodytes forsteri
Afo_R003276
N
AGAP007133
Anopheles gambiae
AGAP007133
N
Alligator_sinensis_CCG015084.1
Alligator sinensis
Alligator_sinensis_CCG015084.1
N
AMEC009276
Anopheles melas
AMEC009276
N
AMEM004763
Anopheles merus
AMEM004763
N
AMIN011274
Anopheles minimus
AMIN011274
N
AQUA002064
Anopheles quadriannulatus
AQUA002064
N
Camta
Drosophila melanogaster
FBgn0259234
N
CAMTA1
Canis familiaris
ENSCAFG00000019650
N
CAMTA1
Cavia porcellus
ENSCPOG00000014759
N
Camta1
Dipodomys ordii
ENSDORG00000003017
N
CAMTA1
Equus caballus
ENSECAG00000020792
N
CAMTA1
Echinops telfairi
ENSETEG00000006373
N
CAMTA1
Homo sapiens
ENSG00000171735
N
CAMTA1
Gorilla gorilla
ENSGGOG00000003577
N
Camta1
Mus musculus
ENSMUSG00000014592
N
CAMTA1
Otolemur garnettii
ENSOGAG00000009792
N
CAMTA1
Ochotona princeps
ENSOPRG00000015968
N
CAMTA1
Pan troglodytes
ENSPTRG00000000096
N
CAMTA1
Pteropus vampyrus
ENSPVAG00000005390
N
Camta1
Rattus norvegicus
ENSRNOG00000018602
N
CAMTA1
Tupaia belangeri
ENSTBEG00000001406
N
CAMTA1
Taeniopygia guttata
ENSTGUG00000002566
N
CAMTA1
Tursiops truncatus
ENSTTRG00000010366
N
camta1a
Danio rerio
ENSDARG00000077428
N
camta1a
Takifugu rubripes
ENSTRUG00000013622
N
camta1b
Danio rerio
ENSDARG00000007824
N
camta1b
Gasterosteus aculeatus
ENSGACG00000007914
N
camta1b
Oryzias latipes
ENSORLG00000016337
N
camta1b
Takifugu rubripes
ENSTRUG00000010941
N
CAMTA2
Bos taurus
ENSBTAG00000008591
N
CAMTA2
Canis familiaris
ENSCAFG00000015674
N
CAMTA2
Callithrix jacchus
ENSCJAG00000011609
N
CAMTA2
Cavia porcellus
ENSCPOG00000007319
N
camta2
Danio rerio
ENSDARG00000092799
N
CAMTA2
Dasypus novemcinctus
ENSDNOG00000036357
N
Camta2
Dipodomys ordii
ENSDORG00000011763
N
CAMTA2
Equus caballus
ENSECAG00000019370
N
CAMTA2
Felis catus
ENSFCAG00000008698
N
CAMTA2
Homo sapiens
ENSG00000108509
N
CAMTA2
Gorilla gorilla
ENSGGOG00000009188
N
CAMTA2
Loxodonta africana
ENSLAFG00000012042
N
CAMTA2
Microcebus murinus
ENSMICG00000012537
N
CAMTA2
Myotis lucifugus
ENSMLUG00000014019
N
CAMTA2
Macaca mulatta
ENSMMUG00000009176
N
CAMTA2
Monodelphis domestica
ENSMODG00000005219
N
Camta2
Mus musculus
ENSMUSG00000040712
N
CAMTA2
Oryctolagus cuniculus
ENSOCUG00000001109
N
CAMTA2
Otolemur garnettii
ENSOGAG00000014734
N
CAMTA2
Pan troglodytes
ENSPTRG00000023129
N
CAMTA2
Pteropus vampyrus
ENSPVAG00000003768
N
Camta2
Rattus norvegicus
ENSRNOG00000004283
N
CAMTA2
Sorex araneus
ENSSARG00000004137
N
CAMTA2
Sus scrofa
ENSSSCG00000017902
N
CAMTA2
Tupaia belangeri
ENSTBEG00000003130
N
CAMTA2
Tursiops truncatus
ENSTTRG00000001303
N
camta2
Xenopus tropicalis
XB-GENE-1033052
N
CapteG124203
Capitella teleta
CapteG124203
N
CGI_10022084
Crassostrea gigas
CGI_10022084
N
DAPPUDRAFT_312030
Daphnia pulex
DAPPUDRAFT_312030
N
ENSAMEG00000006258
Ailuropoda melanoleuca
ENSAMEG00000006258
N
ENSAMXG00000003636
Astyanax mexicanus
ENSAMXG00000003636
N
ENSAMXG00000013350
Astyanax mexicanus
ENSAMXG00000013350
N
ENSAMXG00000020082
Astyanax mexicanus
ENSAMXG00000020082
N
ENSBTAP00000011330-D1
Bos grunniens
ENSBTAP00000011330-D1
N
ENSCSAG00000012903
Chlorocebus sabaeus
ENSCSAG00000012903
N
ENSFALG00000009834
Ficedula albicollis
ENSFALG00000009834
N
ENSFCAG00000022960
Felis catus
ENSFCAG00000022960
N
ENSGACG00000001106
Gasterosteus aculeatus
ENSGACG00000001106
N
ENSGALG00000000610
Gallus gallus
ENSGALG00000000610
N
ENSGMOG00000017650
Gadus morhua
ENSGMOG00000017650
N
ENSGMOG00000019408
Gadus morhua
ENSGMOG00000019408
N
ENSLACG00000014089
Latimeria chalumnae
ENSLACG00000014089
N
ENSLACG00000014574
Latimeria chalumnae
ENSLACG00000014574
N
ENSLOCG00000013712
Lepisosteus oculatus
ENSLOCG00000013712
N
ENSMEUG00000007952
Macropus eugenii
ENSMEUG00000007952
N
ENSMODG00000005842
Monodelphis domestica
ENSMODG00000005842
N
ENSMPUG00000006733
Mustela putorius furo
ENSMPUG00000006733
N
ENSMPUG00000011010
Mustela putorius furo
ENSMPUG00000011010
N
ENSNLEG00000008706
Nomascus leucogenys
ENSNLEG00000008706
N
ENSNLEG00000017452
Nomascus leucogenys
ENSNLEG00000017452
N
ENSOANG00000030450
Ornithorhynchus anatinus
ENSOANG00000030450
N
ENSOARG00000004897
Ovis aries
ENSOARG00000004897
N
ENSONIG00000004505
Oreochromis niloticus
ENSONIG00000004505
N
ENSONIG00000019368
Oreochromis niloticus
ENSONIG00000019368
N
ENSP00000306522-D1
Bos grunniens
ENSP00000306522-D1
N
ENSP00000321813
Macaca fascicularis
ENSP00000321813
N
ENSPANG00000024316
Papio anubis
ENSPANG00000024316
N
ENSPFOG00000000859
Poecilia formosa
ENSPFOG00000000859
N
ENSPFOG00000004225
Poecilia formosa
ENSPFOG00000004225
N
ENSPFOG00000016244
Poecilia formosa
ENSPFOG00000016244
N
ENSPPYG00000001932
Pongo abelii
ENSPPYG00000001932
N
ENSPPYG00000007853
Pongo abelii
ENSPPYG00000007853
N
ENSPSIG00000004616
Pelodiscus sinensis
ENSPSIG00000004616
N
ENSSHAG00000006160
Sarcophilus harrisii
ENSSHAG00000006160
N
ENSSTOG00000003897
Ictidomys tridecemlineatus
ENSSTOG00000003897
N
ENSSTOG00000011183
Ictidomys tridecemlineatus
ENSSTOG00000011183
N
ENSTNIG00000001909
Tetraodon nigroviridis
ENSTNIG00000001909
N
ENSTNIG00000003621
Tetraodon nigroviridis
ENSTNIG00000003621
N
ENSTNIG00000012546
Tetraodon nigroviridis
ENSTNIG00000012546
N
ENSTRUG00000000888
Takifugu rubripes
ENSTRUG00000000888
N
ENSTSYG00000007714
Tarsius syrichta
ENSTSYG00000007714
N
ENSXMAG00000001955
Xiphophorus maculatus
ENSXMAG00000001955
N
ENSXMAG00000018742
Xiphophorus maculatus
ENSXMAG00000018742
N
e_gw.96.31.1
Branchiostoma floridae
e_gw.96.31.1
N
fgenesh2_pg.scaffold_96000095
Branchiostoma floridae
fgenesh2_pg.scaffold_96000095
N
GA30460
Drosophila pseudoobscura
FBgn0264597
N
GB48002
Apis mellifera
GB48002
N
GD10658
Drosophila simulans
FBgn0182425
N
Gfo_R002636
Geospiza fortis
Gfo_R002636
N
Hsal_08954--XP_001120489.1_APIME
Harpegnathos saltator
Hsal_08954--XP_001120489.1_APIME
N
ISCW018640
Ixodes scapularis
ISCW018640
N
LCUP001199
Lucilia cuprina
LCUP001199
N
MDOA011429
Musca domestica
MDOA011429
N
Myotis_brandtii_CAMTA2_10007480
Myotis brandtii
Myotis_brandtii_CAMTA2_10007480
N
Ogr01933
Ophisaurus gracilis
Ogr01933
N
PHUM466620
Pediculus humanus
PHUM466620
N
PPAI004941
Phlebotomus papatasi
PPAI004941
N
Pvit_07906
Pogona vitticeps
Pvit_07906
N
RPRC011455
Rhodnius prolixus
RPRC011455
N
Sakowv30004245m.g
Saccoglossus kowalevskii
Sakowv30004245m.g
N
SMAR001697
Strigamia maritima
SMAR001697
N
TC012001
Tribolium castaneum
TC012001
N
XP_002933905
Xenopus tropicalis
XP_002933905
N