CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSXMAG00000003856 *(Xiphophorus maculatus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSXMAG00000003856	T038105_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tfeb M01728_2.00	Mus musculus	CWCGTGAY	RTCACGWG	PBM Weirauch et al.(2014) pTH5072	0.871	0.906
TFEB M02781_2.00	Homo sapiens	RNCACGTGAY	RTCACGTGNY	SELEX Jolma et al.(2013) TFEB_1	0.871	0.906
TFEB M02727_2.00	Homo sapiens	RTCACGTGAY	RTCACGTGAY	SELEX Jolma et al.(2010) TFEB_dimer	0.871	0.906
TFEB M04088_2.00	Homo sapiens	YVCACGTGAYN	NRTCACGTGBR	SELEX Yin et al.(2017) TFEB_eDBD_HT-SELEX	0.871	0.906
TFEB M08718_2.00	Homo sapiens	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_HUMAN.H11MO.0.C	0.871	0.906
Tfeb M08753_2.00	Mus musculus	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_MOUSE.H11MO.0.C	0.871	0.906
TFEB M04089_2.00	Homo sapiens	VNCATGTGAYN	NRTCACATGNB	SELEX Yin et al.(2017) TFEB_eDBD_Methyl-HT-SELEX	0.871	0.906
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSXMAP00000003877	bHLH	244	297	KKDNHNLIERRRRFNINDRIKELGTMIPKTNDLDVRWNKGTILRASVDYIKRMQ

Links
Other bHLH family TFs
Other *Xiphophorus maculatus* TFs