ENSXMAG00000019956 (Xiphophorus maculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSXMAG00000019956 T038204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.883 0.904
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.883 0.904
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.883 0.904
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.883 0.904
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.883 0.904
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.883 0.885
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.879 0.865
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.879 0.865
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.879 0.865
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.879 0.865
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.879 0.865
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.879 0.865
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.879 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000020003 bHLH 97 148

Links

Other bHLH family TFs
Other Xiphophorus maculatus TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_16575 Aegilops tauschii F775_16575 N
F775_18558 Aegilops tauschii F775_18558 N
F775_18978 Aegilops tauschii F775_18978 N
Traes_1AL_3C796C3D3 Triticum aestivum Traes_1AL_3C796C3D3 N
Traes_1BL_37FA9C770 Triticum aestivum Traes_1BL_37FA9C770 N
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_48B701BB41 Triticum aestivum Traes_6AS_48B701BB41 N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BS_1AE1C47BC Triticum aestivum Traes_6BS_1AE1C47BC N
Traes_6BS_276ACF176 Triticum aestivum Traes_6BS_276ACF176 N
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N
Traes_6DS_186AD71E4 Triticum aestivum Traes_6DS_186AD71E4 N
Traes_6DS_87E97B55C Triticum aestivum Traes_6DS_87E97B55C N
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N
TRIUR3_27490 Triticum urartu TRIUR3_27490 N
TRIUR3_28036 Triticum urartu TRIUR3_28036 N