CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000845m.g
(
Setaria italica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Si000845m.g
T044668_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.841
0.429
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.841
0.429
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.841
0.429
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000845m
bHLH
372
420
VKNHVMSERKRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQ
Links
Other
bHLH
family TFs
Other
Setaria italica
TFs
179 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009606
Calypte anna
Aan_R009606
I
Afo_R005157
Aptenodytes forsteri
Afo_R005157
I
Afo_R005555
Aptenodytes forsteri
Afo_R005555
I
Alligator_sinensis_CCG009102.1
Alligator sinensis
Alligator_sinensis_CCG009102.1
I
Alligator_sinensis_CCG011017.1
Alligator sinensis
Alligator_sinensis_CCG011017.1
I
Aqu1.218726
Amphimedon queenslandica
Aqu1.218726
I
Brh_R005579
Buceros rhinoceros
Brh_R005579
I
Brh_R011837
Buceros rhinoceros
Brh_R011837
I
CapteG182542
Capitella teleta
CapteG182542
I
CapteG228069
Capitella teleta
CapteG228069
I
CGI_10018323
Crassostrea gigas
CGI_10018323
I
Cmyd_10005434
Chelonia mydas
Cmyd_10005434
I
Cmyd_10006677
Chelonia mydas
Cmyd_10006677
I
ENSAMEG00000009592
Ailuropoda melanoleuca
ENSAMEG00000009592
I
ENSAMEG00000011612
Ailuropoda melanoleuca
ENSAMEG00000011612
I
ENSAMXG00000011237
Astyanax mexicanus
ENSAMXG00000011237
I
ENSAMXG00000018013
Astyanax mexicanus
ENSAMXG00000018013
I
ENSAPLG00000003195
Anas platyrhynchos
ENSAPLG00000003195
I
ENSAPLG00000007121
Anas platyrhynchos
ENSAPLG00000007121
I
ENSCAFG00000032212
Canis familiaris
ENSCAFG00000032212
I
ENSCPOG00000000704
Cavia porcellus
ENSCPOG00000000704
I
ENSCSAG00000001134
Chlorocebus sabaeus
ENSCSAG00000001134
I
ENSCSAG00000013410
Chlorocebus sabaeus
ENSCSAG00000013410
I
ENSCSAG00000016312
Chlorocebus sabaeus
ENSCSAG00000016312
I
ENSDORG00000009001
Dipodomys ordii
ENSDORG00000009001
I
ENSFALG00000000542
Ficedula albicollis
ENSFALG00000000542
I
ENSFALG00000008605
Ficedula albicollis
ENSFALG00000008605
I
ENSFALG00000011461
Ficedula albicollis
ENSFALG00000011461
I
ENSGALG00000021593
Gallus gallus
ENSGALG00000021593
I
ENSGMOG00000011084
Gadus morhua
ENSGMOG00000011084
I
ENSGMOG00000013488
Gadus morhua
ENSGMOG00000013488
I
ENSGMOG00000017811
Gadus morhua
ENSGMOG00000017811
I
ENSLACG00000006098
Latimeria chalumnae
ENSLACG00000006098
I
ENSLACG00000012215
Latimeria chalumnae
ENSLACG00000012215
I
ENSLACG00000015540
Latimeria chalumnae
ENSLACG00000015540
I
ENSLOCG00000001853
Lepisosteus oculatus
ENSLOCG00000001853
I
ENSLOCG00000017268
Lepisosteus oculatus
ENSLOCG00000017268
I
ENSMEUG00000007444
Macropus eugenii
ENSMEUG00000007444
I
ENSMPUG00000001859
Mustela putorius furo
ENSMPUG00000001859
I
ENSMPUG00000014412
Mustela putorius furo
ENSMPUG00000014412
I
ENSMPUG00000014531
Mustela putorius furo
ENSMPUG00000014531
I
ENSNLEG00000002239
Nomascus leucogenys
ENSNLEG00000002239
I
ENSNLEG00000013972
Nomascus leucogenys
ENSNLEG00000013972
I
ENSOANG00000022119
Ornithorhynchus anatinus
ENSOANG00000022119
I
ENSOARG00000007915
Ovis aries
ENSOARG00000007915
I
ENSOARG00000008063
Ovis aries
ENSOARG00000008063
I
ENSOARG00000020088
Ovis aries
ENSOARG00000020088
I
ENSOCUG00000029649
Oryctolagus cuniculus
ENSOCUG00000029649
I
ENSONIG00000003087
Oreochromis niloticus
ENSONIG00000003087
I
ENSONIG00000004726
Oreochromis niloticus
ENSONIG00000004726
I
ENSONIG00000018772
Oreochromis niloticus
ENSONIG00000018772
I
ENSP00000357348
Macaca fascicularis
ENSP00000357348
I
ENSP00000357348-D1
Bos grunniens
ENSP00000357348-D1
I
ENSP00000361943
Macaca fascicularis
ENSP00000361943
I
ENSP00000361943-D1
Bos grunniens
ENSP00000361943-D1
I
ENSPANG00000006227
Papio anubis
ENSPANG00000006227
I
ENSPANG00000018687
Papio anubis
ENSPANG00000018687
I
ENSPFOG00000001913
Poecilia formosa
ENSPFOG00000001913
I
ENSPFOG00000015536
Poecilia formosa
ENSPFOG00000015536
I
ENSPPYG00000001505
Pongo abelii
ENSPPYG00000001505
I
ENSPPYG00000016987
Pongo abelii
ENSPPYG00000016987
I
ENSPPYG00000018693
Pongo abelii
ENSPPYG00000018693
I
ENSPSIG00000003791
Pelodiscus sinensis
ENSPSIG00000003791
I
ENSPSIG00000012495
Pelodiscus sinensis
ENSPSIG00000012495
I
ENSSHAG00000016487
Sarcophilus harrisii
ENSSHAG00000016487
I
ENSSHAG00000017958
Sarcophilus harrisii
ENSSHAG00000017958
I
ENSSHAG00000018213
Sarcophilus harrisii
ENSSHAG00000018213
I
ENSSSCG00000024651
Sus scrofa
ENSSSCG00000024651
I
ENSSTOG00000022371
Ictidomys tridecemlineatus
ENSSTOG00000022371
I
ENSSTOG00000023191
Ictidomys tridecemlineatus
ENSSTOG00000023191
I
ENSXMAG00000006950
Xiphophorus maculatus
ENSXMAG00000006950
I
ENSXMAG00000014241
Xiphophorus maculatus
ENSXMAG00000014241
I
estExt_GenewiseH_1.C_4620016
Branchiostoma floridae
estExt_GenewiseH_1.C_4620016
I
Gfo_R007552
Geospiza fortis
Gfo_R007552
I
Gfo_R016187
Geospiza fortis
Gfo_R016187
I
HEY1
Bos taurus
ENSBTAG00000015717
I
HEY1
Canis familiaris
ENSCAFG00000008391
I
HEY1
Cavia porcellus
ENSCPOG00000008527
I
hey1
Danio rerio
ENSDARG00000070538
I
HEY1
Dasypus novemcinctus
ENSDNOG00000031981
I
HEY1
Equus caballus
ENSECAG00000017010
I
HEY1
Felis catus
ENSFCAG00000025542
I
HEY1
Homo sapiens
ENSG00000164683
D
hey1
Gasterosteus aculeatus
ENSGACG00000003436
I
HEY1
Gasterosteus aculeatus
ENSGACG00000008712
I
HEY1
Gorilla gorilla
ENSGGOG00000009960
I
HEY1
Loxodonta africana
ENSLAFG00000011488
I
HEY1
Monodelphis domestica
ENSMODG00000006648
I
Hey1
Mus musculus
ENSMUSG00000040289
I
HEY1
Otolemur garnettii
ENSOGAG00000007210
I
HEY1
Oryzias latipes
ENSORLG00000008268
I
Hey1
Rattus norvegicus
ENSRNOG00000011593
I
HEY1
Sus scrofa
ENSSSCG00000006159
I
hey1
Tetraodon nigroviridis
ENSTNIG00000017785
I
HEY1
Tetraodon nigroviridis
ENSTNIG00000018401
I
HEY1
Takifugu rubripes
ENSTRUG00000013573
I
hey1
Takifugu rubripes
ENSTRUG00000014561
I
hey1
Xenopus tropicalis
XB-GENE-486694
I
hey1.S
Xenopus laevis
XB-GENE-865637
I
HEY2
Anolis carolinensis
ENSACAG00000001813
I
HEY2
Bos taurus
ENSBTAG00000000919
I
HEY2
Callithrix jacchus
ENSCJAG00000003761
I
HEY2
Cavia porcellus
ENSCPOG00000021417
I
hey2
Danio rerio
ENSDARG00000013441
I
HEY2
Dasypus novemcinctus
ENSDNOG00000044967
I
HEY2
Equus caballus
ENSECAG00000014094
I
HEY2
Erinaceus europaeus
ENSEEUG00000014040
I
HEY2
Felis catus
ENSFCAG00000026914
I
HEY2
Homo sapiens
ENSG00000135547
D
HEY2
Loxodonta africana
ENSLAFG00000014208
I
HEY2
Meleagris gallopavo
ENSMGAG00000013281
I
HEY2
Myotis lucifugus
ENSMLUG00000002617
I
HEY2
Macaca mulatta
ENSMMUG00000009491
I
HEY2
Monodelphis domestica
ENSMODG00000017701
I
Hey2
Mus musculus
ENSMUSG00000019789
D
HEY2
Otolemur garnettii
ENSOGAG00000027812
I
HEY2
Pan troglodytes
ENSPTRG00000018574
I
Hey2
Rattus norvegicus
ENSRNOG00000013364
I
HEY2
Sorex araneus
ENSSARG00000011755
I
HEY2
Sus scrofa
ENSSSCG00000004223
I
HEY2
Tupaia belangeri
ENSTBEG00000008836
I
HEY2
Taeniopygia guttata
ENSTGUG00000011792
I
HEY2
Vicugna pacos
ENSVPAG00000010498
I
hey2
Xenopus tropicalis
XB-GENE-485923
I
HEYL
Bos taurus
ENSBTAG00000008688
I
heyl
Danio rerio
ENSDARG00000055798
I
HEYL
Dasypus novemcinctus
ENSDNOG00000010392
I
HEYL
Equus caballus
ENSECAG00000007220
I
HEYL
Felis catus
ENSFCAG00000010963
I
HEYL
Homo sapiens
ENSG00000163909
I
heyl
Gasterosteus aculeatus
ENSGACG00000007492
I
HEYL
Gorilla gorilla
ENSGGOG00000008268
I
HEYL
Loxodonta africana
ENSLAFG00000027563
I
HEYL
Myotis lucifugus
ENSMLUG00000029490
I
HEYL
Macaca mulatta
ENSMMUG00000018861
I
Heyl
Mus musculus
ENSMUSG00000032744
I
HEYL
Ornithorhynchus anatinus
ENSOANG00000010000
I
HEYL
Oryctolagus cuniculus
ENSOCUG00000000560
I
HEYL
Otolemur garnettii
ENSOGAG00000030877
I
heyl
Oryzias latipes
ENSORLG00000013651
I
HEYL
Pan troglodytes
ENSPTRG00000000574
I
Heyl
Rattus norvegicus
ENSRNOG00000015318
I
heyl
Tetraodon nigroviridis
ENSTNIG00000009228
I
heyl
Takifugu rubripes
ENSTRUG00000003399
I
HEYL
Tursiops truncatus
ENSTTRG00000014353
I
ISCW011251
Ixodes scapularis
ISCW011251
I
L798_14068
Zootermopsis nevadensis
L798_14068
I
LDEC001043
Leptinotarsa decemlineata
LDEC001043
I
LotgiG171867
Lottia gigantea
LotgiG171867
I
Myotis_brandtii_HEY1_10021379
Myotis brandtii
Myotis_brandtii_HEY1_10021379
I
Myotis_brandtii_hey2_10035635
Myotis brandtii
Myotis_brandtii_hey2_10035635
I
Ocbimv22039104m.g
Octopus bimaculoides
Ocbimv22039104m.g
I
Ogr14041
Ophisaurus gracilis
Ogr14041
I
Ogr15033
Ophisaurus gracilis
Ogr15033
I
PABPC4
Canis familiaris
ENSCAFG00000003081
I
PHUM454530
Pediculus humanus
PHUM454530
I
Pvit_00065
Pogona vitticeps
Pvit_00065
I
Pvit_01735
Pogona vitticeps
Pvit_01735
I
Sakowv30023592m.g
Saccoglossus kowalevskii
Sakowv30023592m.g
I
SPU_009465
Strongylocentrotus purpuratus
SPU_009465
I
TC001593
Tribolium castaneum
TC001593
I
tetur01g03020
Tetranychus urticae
tetur01g03020
I
YQE_09192
Dendroctonus ponderosae
YQE_09192
I