Solyc05g006650.2 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc05g006650.2 T045071_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.914 0.961
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.914 0.961
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.901 0.863
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.843
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.843
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.784
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.862 0.824
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.862 0.824
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.862 0.784
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.862 0.784
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.851 0.824
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.851 0.804
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.851 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g006650.2.1 bHLH 153 203

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

874 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011013 Aedes aegypti AAEL011013 I 0.000
AALB007758 Anopheles albimanus AALB007758 I 0.000
AALB007964 Anopheles albimanus AALB007964 I 0.000
Aan_R007307 Calypte anna Aan_R007307 N 0.000
Aan_R007898 Calypte anna Aan_R007898 N 0.000
AARA003714 Anopheles arabiensis AARA003714 I 0.000
AARA010261 Anopheles arabiensis AARA010261 N 0.000
AATE009363 Anopheles atroparvus AATE009363 I 0.000
AATE015141 Anopheles atroparvus AATE015141 I 0.000
ACHR006645 Anopheles christyi ACHR006645 I 0.000
ACHR009289 Anopheles christyi ACHR009289 N 0.000
ACOM023265 Anopheles coluzzii ACOM023265 I 0.000
ACOM027359 Anopheles coluzzii ACOM027359 I 0.000
ACOM042361 Anopheles coluzzii ACOM042361 N 0.000
ACUA010023 Anopheles culicifacies ACUA010023 N 0.000
ADAC005208 Anopheles darlingi ADAC005208 I 0.000
ADIR001121 Anopheles dirus ADIR001121 I 0.000
ADIR009318 Anopheles dirus ADIR009318 I 0.000
AEPI002639 Anopheles epiroticus AEPI002639 N 0.000
AEPI010343 Anopheles epiroticus AEPI010343 I 0.000
AFAF010850 Anopheles farauti AFAF010850 I 0.000
AFAF014618 Anopheles farauti AFAF014618 I 0.000
Afo_R003668 Aptenodytes forsteri Afo_R003668 N 0.000
Afo_R004895 Aptenodytes forsteri Afo_R004895 N 0.000
AFUN000102 Anopheles funestus AFUN000102 I 0.000
AFUN005600 Anopheles funestus AFUN005600 N 0.000
AGAP000773 Anopheles gambiae AGAP000773 N 0.000
AGAP010058 Anopheles gambiae AGAP010058 I 0.000
Alligator_sinensis_CCG004879.1 Alligator sinensis Alligator_sinensis_CCG004879.1 N 0.000
AMAM016994 Anopheles maculatus AMAM016994 N 0.000
AMEC013102 Anopheles melas AMEC013102 N 0.000
AMEC021622 Anopheles melas AMEC021622 I 0.000
AMEM005407 Anopheles merus AMEM005407 I 0.000
AMIN005129 Anopheles minimus AMIN005129 N 0.000
AMIN006671 Anopheles minimus AMIN006671 I 0.000
AQUA008255 Anopheles quadriannulatus AQUA008255 N 0.000
AQUA009218 Anopheles quadriannulatus AQUA009218 I 0.000
ASIS004049 Anopheles sinensis ASIS004049 I 0.000
ASTEI03596 Anopheles stephensi ASTEI03596 N 0.000
ASTEI03921 Anopheles stephensi ASTEI03921 I 0.000
A_05788 Schistosoma haematobium A_05788 N 0.000
BGIBMGA003821 Bombyx mori BGIBMGA003821 I 0.000
Brh_R001528 Buceros rhinoceros Brh_R001528 N 0.000
CGI_10023142 Crassostrea gigas CGI_10023142 N 0.000
Cmyd_10005300 Chelonia mydas Cmyd_10005300 N 0.000
Cmyd_10020168 Chelonia mydas Cmyd_10020168 N 0.000
CPIJ009948 Culex quinquefasciatus CPIJ009948 I 0.000
CpipJ_CPIJ009948 Culex pipiens CpipJ_CPIJ009948 I 0.000
csin104979 Clonorchis sinensis csin104979 N 0.000
D915_00831 Fasciola hepatica D915_00831 N 0.000
DAPPUDRAFT_311851 Daphnia pulex DAPPUDRAFT_311851 I 0.000
ENSAMEG00000005588 Ailuropoda melanoleuca ENSAMEG00000005588 N 0.000
ENSAMEG00000014765 Ailuropoda melanoleuca ENSAMEG00000014765 N 0.000
ENSAMXG00000001377 Astyanax mexicanus ENSAMXG00000001377 N 0.000
ENSAMXG00000008897 Astyanax mexicanus ENSAMXG00000008897 N 0.000
ENSAPLG00000012534 Anas platyrhynchos ENSAPLG00000012534 N 0.000
ENSAPLG00000014050 Anas platyrhynchos ENSAPLG00000014050 N 0.000
ENSCSAG00000008567 Chlorocebus sabaeus ENSCSAG00000008567 N 0.000
ENSCSAG00000014652 Chlorocebus sabaeus ENSCSAG00000014652 N 0.000
ENSDORG00000008569 Dipodomys ordii ENSDORG00000008569 N 0.000
ENSFALG00000005247 Ficedula albicollis ENSFALG00000005247 N 0.000
ENSGMOG00000006637 Gadus morhua ENSGMOG00000006637 N 0.000
ENSGMOG00000018211 Gadus morhua ENSGMOG00000018211 N 0.000
ENSLACG00000012873 Latimeria chalumnae ENSLACG00000012873 N 0.000
ENSLACG00000015924 Latimeria chalumnae ENSLACG00000015924 N 0.000
ENSLOCG00000005059 Lepisosteus oculatus ENSLOCG00000005059 N 0.000
ENSLOCG00000016561 Lepisosteus oculatus ENSLOCG00000016561 N 0.000
ENSMEUG00000011682 Macropus eugenii ENSMEUG00000011682 N 0.000
ENSMMUG00000015564 Macaca mulatta ENSMMUG00000015564 N 0.000
ENSMPUG00000001668 Mustela putorius furo ENSMPUG00000001668 N 0.000
ENSMPUG00000008240 Mustela putorius furo ENSMPUG00000008240 N 0.000
ENSNLEG00000004481 Nomascus leucogenys ENSNLEG00000004481 N 0.000
ENSNLEG00000013870 Nomascus leucogenys ENSNLEG00000013870 N 0.000
ENSOARG00000011739 Ovis aries ENSOARG00000011739 N 0.000
ENSOARG00000014072 Ovis aries ENSOARG00000014072 N 0.000
ENSONIG00000014696 Oreochromis niloticus ENSONIG00000014696 N 0.000
ENSONIG00000016544 Oreochromis niloticus ENSONIG00000016544 N 0.000
ENSP00000262901 Macaca fascicularis ENSP00000262901 N 0.000
ENSP00000290399 Macaca fascicularis ENSP00000290399 N 0.000
ENSP00000290399-D1 Bos grunniens ENSP00000290399-D1 N 0.000
ENSP00000358210-D1 Bos grunniens ENSP00000358210-D1 N 0.000
ENSPANG00000011218 Papio anubis ENSPANG00000011218 N 0.000
ENSPANG00000020491 Papio anubis ENSPANG00000020491 N 0.000
ENSPFOG00000002603 Poecilia formosa ENSPFOG00000002603 N 0.000
ENSPPYG00000011405 Pongo abelii ENSPPYG00000011405 N 0.000
ENSPPYG00000016868 Pongo abelii ENSPPYG00000016868 N 0.000
ENSPSIG00000002579 Pelodiscus sinensis ENSPSIG00000002579 N 0.000
ENSSHAG00000009425 Sarcophilus harrisii ENSSHAG00000009425 N 0.000
ENSSHAG00000016220 Sarcophilus harrisii ENSSHAG00000016220 N 0.000
ENSSTOG00000027359 Ictidomys tridecemlineatus ENSSTOG00000027359 N 0.000
ENSTNIG00000019722 Tetraodon nigroviridis ENSTNIG00000019722 N 0.000
ENSTSYG00000005255 Tarsius syrichta ENSTSYG00000005255 N 0.000
ENSTSYG00000007116 Tarsius syrichta ENSTSYG00000007116 N 0.000
ENSXMAG00000016785 Xiphophorus maculatus ENSXMAG00000016785 N 0.000
ENSXMAG00000019075 Xiphophorus maculatus ENSXMAG00000019075 N 0.000
estExt_GenewiseH_1.C_790104 Branchiostoma floridae estExt_GenewiseH_1.C_790104 N 0.000
GA26599 Drosophila pseudoobscura FBgn0247972 I 0.000
GD18883 Drosophila simulans FBgn0190394 I 0.000
GF17581 Drosophila ananassae FBgn0094599 I 0.000
Gfo_R003852 Geospiza fortis Gfo_R003852 N 0.000
Gfo_R010900 Geospiza fortis Gfo_R010900 N 0.000
GG19445 Drosophila erecta FBgn0111648 I 0.000
GH18379 Drosophila grimshawi FBgn0125847 I 0.000
GI23369 Drosophila mojavensis FBgn0146095 I 0.000
GK22407 Drosophila willistoni FBgn0224386 I 0.000
GL24392 Drosophila persimilis FBgn0161981 I 0.000
HelroG89969 Helobdella robusta HelroG89969 N 0.000
HMEL008134 Heliconius melpomene HMEL008134 I 0.000
KGM_03494 Danaus plexippus KGM_03494 I 0.000
L798_01260 Zootermopsis nevadensis L798_01260 N 0.000
LCUP006648 Lucilia cuprina LCUP006648 I 0.000
LDEC014245 Leptinotarsa decemlineata LDEC014245 I 0.000
LotgiG106747 Lottia gigantea LotgiG106747 N 0.000
MDOA008891 Musca domestica MDOA008891 I 0.000
MESCA003744 Megaselia scalaris MESCA003744 I 0.000
Myotis_brandtii_SIM1_10034719 Myotis brandtii Myotis_brandtii_SIM1_10034719 N 0.000
Ocbimv22031168m.g Octopus bimaculoides Ocbimv22031168m.g N 0.000
Ogr12757 Ophisaurus gracilis Ogr12757 N 0.000
PHUM080130 Pediculus humanus PHUM080130 N 0.000
Pvit_04770 Pogona vitticeps Pvit_04770 N 0.000
Pvit_09298 Pogona vitticeps Pvit_09298 N 0.000
PXEA_0002490601 Protopolystoma xenopodis PXEA_0002490601 N 0.000
RPRC001595 Rhodnius prolixus RPRC001595 N 0.000
sim Drosophila melanogaster FBgn0004666 D 0.000
sim Drosophila virilis FBgn0014842 I 0.000
SIM1 Anolis carolinensis ENSACAG00000010256 N 0.000
SIM1 Bos taurus ENSBTAG00000002294 N 0.000
SIM1 Canis familiaris ENSCAFG00000003538 N 0.000
SIM1 Choloepus hoffmanni ENSCHOG00000005099 N 0.000
SIM1 Callithrix jacchus ENSCJAG00000001495 N 0.000
SIM1 Cavia porcellus ENSCPOG00000013987 N 0.000
SIM1 Dasypus novemcinctus ENSDNOG00000010261 N 0.000
SIM1 Equus caballus ENSECAG00000009161 N 0.000
SIM1 Erinaceus europaeus ENSEEUG00000009806 N 0.000
SIM1 Echinops telfairi ENSETEG00000010692 N 0.000
SIM1 Felis catus ENSFCAG00000005942 N 0.000
SIM1 Homo sapiens ENSG00000112246 N 0.000
SIM1 Gallus gallus ENSGALG00000015466 N 0.000
SIM1 Gorilla gorilla ENSGGOG00000017108 N 0.000
SIM1 Loxodonta africana ENSLAFG00000006594 N 0.000
SIM1 Microcebus murinus ENSMICG00000008851 N 0.000
SIM1 Myotis lucifugus ENSMLUG00000002874 N 0.000
SIM1 Macaca mulatta ENSMMUG00000022285 N 0.000
SIM1 Monodelphis domestica ENSMODG00000018087 N 0.000
Sim1 Mus musculus ENSMUSG00000019913 N 0.000
SIM1 Ornithorhynchus anatinus ENSOANG00000008943 N 0.000
SIM1 Oryctolagus cuniculus ENSOCUG00000002759 N 0.000
SIM1 Otolemur garnettii ENSOGAG00000009865 N 0.000
SIM1 Ochotona princeps ENSOPRG00000013168 N 0.000
SIM1 Procavia capensis ENSPCAG00000008763 N 0.000
SIM1 Pan troglodytes ENSPTRG00000018447 N 0.000
SIM1 Pteropus vampyrus ENSPVAG00000012822 N 0.000
Sim1 Rattus norvegicus ENSRNOG00000037600 N 0.000
SIM1 Sorex araneus ENSSARG00000000736 N 0.000
SIM1 Sus scrofa ENSSSCG00000004357 N 0.000
SIM1 Tupaia belangeri ENSTBEG00000005949 N 0.000
SIM1 Taeniopygia guttata ENSTGUG00000012278 N 0.000
SIM1 Tursiops truncatus ENSTTRG00000008248 N 0.000
SIM1 Vicugna pacos ENSVPAG00000001407 N 0.000
sim1 Xenopus tropicalis XB-GENE-485816 N 0.000
sim1a Danio rerio ENSDARG00000023316 N 0.000
sim1a Gasterosteus aculeatus ENSGACG00000014149 N 0.000
sim1b Danio rerio ENSDARG00000013789 N 0.000
sim1b Gasterosteus aculeatus ENSGACG00000009479 N 0.000
sim1b Tetraodon nigroviridis ENSTNIG00000012304 N 0.000
sim1b Takifugu rubripes ENSTRUG00000018267 N 0.000
SIM2 Anolis carolinensis ENSACAG00000008765 N 0.000
SIM2 Canis familiaris ENSCAFG00000009686 N 0.000
SIM2 Callithrix jacchus ENSCJAG00000002704 N 0.000
SIM2 Cavia porcellus ENSCPOG00000023156 N 0.000
SIM2 Dasypus novemcinctus ENSDNOG00000003669 N 0.000
Sim2 Dipodomys ordii ENSDORG00000011548 N 0.000
SIM2 Equus caballus ENSECAG00000016631 N 0.000
SIM2 Echinops telfairi ENSETEG00000012055 N 0.000
SIM2 Felis catus ENSFCAG00000023063 N 0.000
SIM2 Homo sapiens ENSG00000159263 N 0.000
SIM2 Gallus gallus ENSGALG00000016044 N 0.000
SIM2 Gorilla gorilla ENSGGOG00000014943 N 0.000
SIM2 Loxodonta africana ENSLAFG00000000122 N 0.000
SIM2 Microcebus murinus ENSMICG00000013168 N 0.000
SIM2 Monodelphis domestica ENSMODG00000021008 N 0.000
Sim2 Mus musculus ENSMUSG00000062713 N 0.000
SIM2 Oryctolagus cuniculus ENSOCUG00000012903 N 0.000
SIM2 Otolemur garnettii ENSOGAG00000028990 N 0.000
SIM2 Procavia capensis ENSPCAG00000015289 N 0.000
SIM2 Pan troglodytes ENSPTRG00000013894 N 0.000
SIM2 Pteropus vampyrus ENSPVAG00000000853 N 0.000
Sim2 Rattus norvegicus ENSRNOG00000054203 N 0.000
SIM2 Tupaia belangeri ENSTBEG00000011573 N 0.000
SIM2 Taeniopygia guttata ENSTGUG00000004856 N 0.000
SIM2 Tursiops truncatus ENSTTRG00000017084 N 0.000
sim2.S Xenopus laevis XB-GENE-1013959 N 0.000
Sjc_0126700 Schistosoma japonicum Sjc_0126700 N 0.000
SMAR001482 Strigamia maritima SMAR001482 N 0.000
Smp_165270 Schistosoma mansoni Smp_165270 N 0.000
SMRZ_0000943001 Schistosoma margrebowiei SMRZ_0000943001 N 0.000
SMTD_0000610501 Schistosoma mattheei SMTD_0000610501 N 0.000
SMU15015785 Schmidtea mediterranea SMU15015785 N 0.000
SPU_013962 Strongylocentrotus purpuratus SPU_013962 N 0.000
SROB_0001806001 Schistosoma rodhaini SROB_0001806001 N 0.000
T265_14441 Opisthorchis viverrini T265_14441 N 0.000
Tal_R009812 Tyto alba Tal_R009812 N 0.000
TC016204 Tribolium castaneum TC016204 I 0.000
tetur06g06010 Tetranychus urticae tetur06g06010 N 0.000
TRE_0000325801 Trichobilharzia regenti TRE_0000325801 N 0.000
XP_002941575 Xenopus tropicalis XP_002941575 N 0.000
YQE_07686 Dendroctonus ponderosae YQE_07686 I 0.000