CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cflo_05077--XP_624468.1_APIME
(
Camponotus floridanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cflo_05077--XP_624468.1_APIME
T046895_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dimm
M03613_2.00
Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV
SELEX
Nitta et al.(2015)
dimm_1
0.886
0.923
dimm
M03614_2.00
Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV
SELEX
Nitta et al.(2015)
dimm_2
0.886
0.923
dimm
M05976_2.00
Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD
B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091
0.886
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_05077--XP_624468.1_APIME
bHLH
476
528
RRLESNERERMRMHSLNDAFQSLREVIPHVTKERRLSKIETLTLAKNYIVALT
Links
Other
bHLH
family TFs
Other
Camponotus floridanus
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
3056_YDL048C
Saccharomyces mikatae
3056_YDL048C
I
3579_YDL048C
Saccharomyces paradoxus
3579_YDL048C
I
3742_YDL048C
Saccharomyces bayanus
3742_YDL048C
I
NCAS_0A02360
Naumovozyma castellii
NCAS_0A02360
I
NCAS_0J01300
Naumovozyma castellii
NCAS_0J01300
I
NDAI_0D04510
Naumovozyma dairenensis
NDAI_0D04510
I
Scas_Contig670.2
Saccharomyces castellii
Scas_Contig670.2
I
Scas_Contig683.30
Saccharomyces castellii
Scas_Contig683.30
I
STP4
Saccharomyces cerevisiae
YDL048C
D
SU7_0544
Saccharomyces arboricola
SU7_0544
I
TBLA_0I02770
Tetrapisispora blattae
TBLA_0I02770
I
TDEL_0E01520
Torulaspora delbrueckii
TDEL_0E01520
I
ZYRO0B07436g
Zygosaccharomyces rouxii
ZYRO0B07436g
I