STP4 (Saccharomyces cerevisiae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YDL048C T131825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STP4
M00018_2.00		 Saccharomyces cerevisiae
NNNKSTRDN
NHYASMNNN		 PBM
Badis et al.(2008)
STP4_2135		 (Direct) (Direct)
STP4
M01526_2.00		 Saccharomyces cerevisiae
TRCGGCKB
VMGCCGYA		 PBM
Zhu et al.(2009)
Stp4		 (Direct) (Direct)
STP4
M07448_2.00		 Saccharomyces cerevisiae
NGCGCTABH
DVTAGCGCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0397.1		 (Direct) (Direct)
STP4
M08512_2.00		 Saccharomyces cerevisiae
NGCGCTABH
DVTAGCGCN		 Misc
DeBoer et al.(2011)
YDL048C_559		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STP3
M00034_2.00 		Saccharomyces cerevisiae
NTAGCGBD
HVCGCTAN		 PBM
Badis et al.(2008)
STP3_4483 		0.788 0.913
STP3
M07464_2.00 		Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0396.1 		0.788 0.913
STP3
M08535_2.00 		Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH		 Misc
DeBoer et al.(2011)
YLR375W_568 		0.788 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00018_2.00 C2H2 ZF 51 73
M01526_2.00 C2H2 ZF 304 326

DNA Binding Domains

Protein ID Domain From To Sequence
YDL048C C2H2 ZF 304 326

Links

Other C2H2 ZF family TFs
Other Saccharomyces cerevisiae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0A02360 Naumovozyma castellii NCAS_0A02360 I 0.827
NCAS_0J01300 Naumovozyma castellii NCAS_0J01300 I 0.827
NDAI_0D04510 Naumovozyma dairenensis NDAI_0D04510 I 0.827
TDEL_0E01520 Torulaspora delbrueckii TDEL_0E01520 I 0.827
ZYRO0B07436g Zygosaccharomyces rouxii ZYRO0B07436g I 0.827
Scas_Contig670.2 Saccharomyces castellii Scas_Contig670.2 I 0.827
Scas_Contig683.30 Saccharomyces castellii Scas_Contig683.30 I 0.827
3056_YDL048C Saccharomyces mikatae 3056_YDL048C I 0.827
3579_YDL048C Saccharomyces paradoxus 3579_YDL048C I 0.827
SU7_0544 Saccharomyces arboricola SU7_0544 I 0.815
3742_YDL048C Saccharomyces bayanus 3742_YDL048C I 0.815
SKUD_202710 Saccharomyces kudriavzevii SKUD_202710 I 0.788
SU7_2363 Saccharomyces arboricola SU7_2363 I 0.788
STP3 Saccharomyces cerevisiae YLR375W D 0.788
15460_YLR375W Saccharomyces paradoxus 15460_YLR375W I 0.788
15823_YLR375W Saccharomyces mikatae 15823_YLR375W I 0.788
16393_YLR375W Saccharomyces bayanus 16393_YLR375W I 0.788
KLTH0D13618g Lachancea thermotolerans KLTH0D13618g I 0.776
ZBAI_02561 Zygosaccharomyces bailii ZBAI_02561 I 0.776
ZBAI_06958 Zygosaccharomyces bailii ZBAI_06958 I 0.776
KLTH0D13618g Kluyveromyces thermotolerans KLTH0D13618g I 0.776
TBLA_0I02770 Tetrapisispora blattae TBLA_0I02770 I 0.769
KAFR_0A06120 Kazachstania africana KAFR_0A06120 I 0.767