Gfo_R006824 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R006824 T047329_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.857 0.887
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.857 0.887
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.857 0.887
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.857 0.887
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.857 0.887
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.857 0.887
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.857 0.887
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.857 0.887
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.857 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006824 bHLH 1 53

Links

Other bHLH family TFs
Other Geospiza fortis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_06293 Aspergillus nidulans CADANIAG00010534 N 0.000
AUEXF2481DRAFT_349637 Aureobasidium subglaciale AUEXF2481DRAFT_349637 N 0.000
BAUCODRAFT_130166 Baudoinia compniacensis BAUCODRAFT_130166 N 0.000
BBA_09512 Beauveria bassiana BBA_09512 N 0.000
Bcin14g05090 Botrytis cinerea Bcin14g05090 N 0.000
CCM_08978 Cordyceps militaris CCM_08978 I 0.000
DOTSEDRAFT_66782 Dothistroma septosporum DOTSEDRAFT_66782 N 0.000
estExt_Genewise1Plus.C_20247 Mycosphaerella fijiensis estExt_Genewise1Plus.C_20247 N 0.000
estExt_Genewise1Plus.C_20430 Cryphonectria parasitica estExt_Genewise1Plus.C_20430 N 0.000
estExt_Genewise1Plus.C_chr_130174 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_130174 N 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00440 I 0.000
EURHEDRAFT_513555 Aspergillus ruber EURHEDRAFT_513555 N 0.000
FFUJ_03763 Fusarium fujikuroi FFUJ_03763 I 0.000
FGRRES_01562 Fusarium graminearum FGRRES_01562 I 0.000
FOXG_11146 Fusarium oxysporum FOXG_11146 I 0.000
GGTG_11194 Gaeumannomyces graminis GGTG_11194 I 0.000
GMDG_02970 Pseudogymnoascus destructans GMDG_02970 N 0.000
GSTUM_00008596001 Tuber melanosporum GSTUM_00008596001 N 0.000
HMPREF1541_02999 Cyphellophora europaea HMPREF1541_02999 N 0.000
M437DRAFT_14214 Aureobasidium melanogenum M437DRAFT_14214 N 0.000
M438DRAFT_275275 Aureobasidium pullulans M438DRAFT_275275 N 0.000
MAJ_06041 Metarhizium majus MAJ_06041 I 0.000
MAPG_00750 Magnaporthe poae MAPG_00750 I 0.000
MBR_06803 Metarhizium brunneum MBR_06803 I 0.000
MCYG_04265 Microsporum canis MCYG_04265 N 0.000
MGU_04562 Metarhizium guizhouense MGU_04562 I 0.000
MYCFIDRAFT_56164 Pseudocercospora fijiensis MYCFIDRAFT_56164 N 0.000
Mycgr3G77753 Zymoseptoria tritici Mycgr3G77753 N 0.000
NechaG65166 Fusarium solani NechaG65166 I 0.000
OCS_05478 Ophiocordyceps sinensis OCS_05478 I 0.000
OIDMADRAFT_194965 Oidiodendron maius OIDMADRAFT_194965 I 0.000
PV09_07306 Verruconis gallopava PV09_07306 N 0.000
TESG_01285 Trichophyton tonsurans TESG_01285 N 0.000
TRIREDRAFT_78799 Trichoderma reesei TRIREDRAFT_78799 I 0.000
TRIVIDRAFT_163283 Trichoderma virens TRIVIDRAFT_163283 N 0.000
V499_05991 Pseudogymnoascus pannorum V499_05991 N 0.000
VHEMI05725 Torrubiella hemipterigena VHEMI05725 I 0.000
X797_000023 Metarhizium robertsii X797_000023 I 0.000