Hsal_01862--XP_001122645.1_APIME (Harpegnathos saltator)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Hsal_01862--XP_001122645.1_APIME T047373_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.875 0.885
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.875 0.885
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.875 0.885
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.875 0.885
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.875 0.885
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.875 0.885
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.875 0.865
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.875 0.865
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.875 0.865
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.875 0.865
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.875 0.865
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.875 0.865
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.875 0.865
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.875 0.865
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.875 0.865
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.875 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_01862--XP_001122645.1_APIME bHLH 31 83

Links

Other bHLH family TFs
Other Harpegnathos saltator TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA024146 Oryza indica BGIOSGA024146 N 0.000
BRADI1G25470 Brachypodium distachyon BRADI1G25470 N 0.000
F775_29547 Aegilops tauschii F775_29547 N 0.000
GRMZM2G058451 Zea mays GRMZM2G058451 N 0.000
LPERR07G15060 Leersia perrieri LPERR07G15060 N 0.000
MLOC_59511 Hordeum vulgare MLOC_59511 N 0.000
OB07G23510 Oryza brachyantha OB07G23510 N 0.000
OBART07G17630 Oryza barthii OBART07G17630 N 0.000
OGLUM07G17270 Oryza glumaepatula OGLUM07G17270 N 0.000
OLONG_014592 Oryza longistaminata OLONG_014592 N 0.000
OMERI07G14510 Oryza meridionalis OMERI07G14510 N 0.000
ONIVA07G15940 Oryza nivara ONIVA07G15940 N 0.000
OPUNC07G16420 Oryza punctata OPUNC07G16420 N 0.000
ORUFI07G18300 Oryza rufipogon ORUFI07G18300 N 0.000
OS07G0543000 Oryza sativa OS07G0543000 N 0.000
Pavir.J35704 Panicum virgatum Pavir.J35704 N 0.000
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.000
PGSC0003DMG400021717 Solanum tuberosum PGSC0003DMG400021717 N 0.000
Sb02g035580 Sorghum bicolor Sb02g035580 N 0.000
Si030877m.g Setaria italica Si030877m.g N 0.000
Solyc02g079970.2 Solanum lycopersicum Solyc02g079970.2 N 0.000
Traes_2AS_FE9AC4EDD Triticum aestivum Traes_2AS_FE9AC4EDD N 0.000
Traes_2BS_7190FAD1A Triticum aestivum Traes_2BS_7190FAD1A N 0.000
Traes_2DS_B05DDA181 Triticum aestivum Traes_2DS_B05DDA181 N 0.000