CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ATOH1_10005345
(
Myotis brandtii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Myotis_brandtii_ATOH1_10005345
T047425_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN
NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.914
1.000
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY
RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.914
1.000
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY
RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.914
1.000
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.914
1.000
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.914
1.000
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.914
1.000
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.914
1.000
ATOH1
M09877_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.914
1.000
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY
RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.914
1.000
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ATOH1_10005345
bHLH
25
77
RRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALS
Links
Other
bHLH
family TFs
Other
Myotis brandtii
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000006110
Chlorocebus sabaeus
ENSCSAG00000006110
I
ENSOARG00000005520
Ovis aries
ENSOARG00000005520
I
ENSPANG00000016381
Papio anubis
ENSPANG00000016381
I
MAZ
Canis familiaris
ENSCAFG00000016964
I
MAZ
Cavia porcellus
ENSCPOG00000019886
I
MAZ
Felis catus
ENSFCAG00000014146
I
MAZ
Homo sapiens
ENSG00000103495
D
MAZ
Tursiops truncatus
ENSTTRG00000005420
I