Ogr17936 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr17936 T047569_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.914 1.000
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.914 1.000
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.914 1.000
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.914 1.000
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.914 1.000
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.914 1.000
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.914 1.000
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.894 0.964
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.894 0.964
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.894 0.964
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.894 0.964
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.894 0.964
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.894 0.964
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.894 0.964
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr17936 bHLH 49 103

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29841.m002892 Ricinus communis 29841.m002892 N
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Cucsa.096040 Cucumis sativus Cucsa.096040 N
Cucsa.310210 Cucumis sativus Cucsa.310210 N
Eucgr.J03074 Eucalyptus grandis Eucgr.J03074 N
Eucgr.J03076 Eucalyptus grandis Eucgr.J03076 N
evm.TU.supercontig_167.13 Carica papaya evm.TU.supercontig_167.13 N
gene15716-v1.0-hybrid Fragaria vesca gene15716-v1.0-hybrid N
GLYMA15G00440 Glycine max GLYMA15G00440 N
GLYMA20G02970 Glycine max GLYMA20G02970 N
Gorai.009G127000 Gossypium raimondii Gorai.009G127000 N
Gorai.010G116000 Gossypium raimondii Gorai.010G116000 N
MDP0000190656 Malus domestica MDP0000190656 N
mgf003540m Mimulus guttatus mgf003540m N
mgf009738m Mimulus guttatus mgf009738m N
PK03582.1 Cannabis sativa PK03582.1 N
PK17289.1 Cannabis sativa PK17289.1 N
Pm004638 Prunus mume Pm004638 N
POPTR_0001s20880 Populus trichocarpa POPTR_0001s20880 N
POPTR_0006s27240 Populus trichocarpa POPTR_0006s27240 N
PRUPE_ppa002480mg Prunus persica PRUPE_ppa002480mg N
PRUPE_ppa002486mg Prunus persica PRUPE_ppa002486mg N
SapurV1A.0043s0920 Salix purpurea SapurV1A.0043s0920 N
Solyc06g068200.1 Solanum lycopersicum Solyc06g068200.1 N
TCM_027270 Theobroma cacao TCM_027270 N
TCM_036972 Theobroma cacao TCM_036972 N