CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G02970
(
Glycine max
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
GLYMA20G02970
T179490_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G02970.2
FAR1
58
143
NFYNIYAKEQGFGIRVSNSWFRLKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIRMVESNRWRIVEVELQHNHQVSP
GLYMA20G02970.3
FAR1
58
143
NFYNIYAKEQGFGIRVSNSWFRLKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIRMVESNRWRIVEVELQHNHQVSP
Links
Other
FAR1
family TFs
Other
Glycine max
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002480mg
Prunus persica
PRUPE_ppa002480mg
N
0.895
Pm004638
Prunus mume
Pm004638
N
0.895
cassava11133.m1
Manihot esculenta
cassava11133.m1
N
0.895
Gorai.010G116000
Gossypium raimondii
Gorai.010G116000
N
0.895
MDP0000190656
Malus domestica
MDP0000190656
N
0.884
TCM_036972
Theobroma cacao
TCM_036972
N
0.872
gene11611-v1.0-hybrid
Fragaria vesca
gene11611-v1.0-hybrid
N
0.872
PK17289.1
Cannabis sativa
PK17289.1
N
0.872
POPTR_0006s27240
Populus trichocarpa
POPTR_0006s27240
N
0.860
Cucsa.310210
Cucumis sativus
Cucsa.310210
N
0.849
SapurV1A.0043s0920
Salix purpurea
SapurV1A.0043s0920
N
0.849
mgf003540m
Mimulus guttatus
mgf003540m
N
0.814
Gorai.009G127000
Gossypium raimondii
Gorai.009G127000
N
0.776
TCM_027270
Theobroma cacao
TCM_027270
N
0.756
evm.TU.supercontig_167.13
Carica papaya
evm.TU.supercontig_167.13
N
0.753
GLYMA15G00440
Glycine max
GLYMA15G00440
N
0.744
PRUPE_ppa002486mg
Prunus persica
PRUPE_ppa002486mg
N
0.744
cassava10866.m1
Manihot esculenta
cassava10866.m1
N
0.744
gene15716-v1.0-hybrid
Fragaria vesca
gene15716-v1.0-hybrid
N
0.741
SapurV1A.0344s0260
Salix purpurea
SapurV1A.0344s0260
N
0.729
PK03582.1
Cannabis sativa
PK03582.1
N
0.729
29841.m002892
Ricinus communis
29841.m002892
N
0.721
Eucgr.J03076
Eucalyptus grandis
Eucgr.J03076
N
0.721
POPTR_0001s20880
Populus trichocarpa
POPTR_0001s20880
N
0.709
Cucsa.096040
Cucumis sativus
Cucsa.096040
N
0.709
Eucgr.J03074
Eucalyptus grandis
Eucgr.J03074
N
0.709
mgf009738m
Mimulus guttatus
mgf009738m
N
0.706