e_gw.35.42.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw.35.42.1 T048283_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.845 0.750
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.845 0.750
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.845 0.750
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.845 0.750
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.845 0.750
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.845 0.750
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.845 0.750
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.845 0.750
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.845 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.35.42.1 bHLH 19 70

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_214436 Agaricus bisporus AGABI2DRAFT_214436 N
BOTBODRAFT_172908 Botryobasidium botryosum BOTBODRAFT_172908 N
BOTBODRAFT_69421 Botryobasidium botryosum BOTBODRAFT_69421 N
CERSUDRAFT_110542 Ceriporiopsis subvermispora CERSUDRAFT_110542 N
CY34DRAFT_25000 Suillus luteus CY34DRAFT_25000 N
CY34DRAFT_289505 Suillus luteus CY34DRAFT_289505 N
EuGene1000576 Heterobasidion annosum EuGene1000576 N
GALMADRAFT_233700 Galerina marginata GALMADRAFT_233700 N
HETIRDRAFT_377690 Heterobasidion irregulare HETIRDRAFT_377690 N
JAAARDRAFT_148211 Jaapia argillacea JAAARDRAFT_148211 N
K443DRAFT_673799 Laccaria amethystina K443DRAFT_673799 N
LACBIDRAFT_300743 Laccaria bicolor LACBIDRAFT_300743 N
M378DRAFT_155674 Amanita muscaria M378DRAFT_155674 N
M404DRAFT_134644 Pisolithus tinctorius M404DRAFT_134644 N
M407DRAFT_26135 Tulasnella calospora M407DRAFT_26135 N
M407DRAFT_29482 Tulasnella calospora M407DRAFT_29482 N
PAXRUDRAFT_157512 Paxillus rubicundulus PAXRUDRAFT_157512 N
PAXRUDRAFT_30764 Paxillus rubicundulus PAXRUDRAFT_30764 N
PIIN_04099 Piriformospora indica PIIN_04099 N
PILCRDRAFT_611893 Piloderma croceum PILCRDRAFT_611893 N
PILCRDRAFT_813552 Piloderma croceum PILCRDRAFT_813552 N
PILCRDRAFT_817327 Piloderma croceum PILCRDRAFT_817327 N
PISMIDRAFT_91300 Pisolithus microcarpus PISMIDRAFT_91300 N
PLEOSDRAFT_49413 Pleurotus ostreatus PLEOSDRAFT_49413 N
SCHCODRAFT_104061 Schizophyllum commune SCHCODRAFT_104061 N
SCHCODRAFT_49649 Schizophyllum commune SCHCODRAFT_49649 N
SERLA73DRAFT_49851 Serpula lacrymans SERLA73DRAFT_49851 N
SERLA73DRAFT_84116 Serpula lacrymans SERLA73DRAFT_84116 N
V565_007950 Rhizoctonia solani V565_007950 N
V565_051410 Rhizoctonia solani V565_051410 N