CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0000989
(
Nectria haematococca
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
fgenesh1_pg.sca_1_chr1_3_0000989
T048515_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0000989
bHLH
307
357
KKQNHIASEQKRRQAIREGFDRLTELVPGLEGQGRSEGLVLKRTVDYMREQ
Links
Other
bHLH
family TFs
Other
Nectria haematococca
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G10380
Leersia perrieri
LPERR02G10380
N
0.000
LPERR02G10620
Leersia perrieri
LPERR02G10620
N
0.000
LPERR02G10770
Leersia perrieri
LPERR02G10770
N
0.000
OB03G33030
Oryza brachyantha
OB03G33030
N
0.000
OBART03G24330
Oryza barthii
OBART03G24330
N
0.000
OBART08G15340
Oryza barthii
OBART08G15340
N
0.000
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
0.000
OGLUM08G16100
Oryza glumaepatula
OGLUM08G16100
N
0.000
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
0.000
OMERI08G12590
Oryza meridionalis
OMERI08G12590
N
0.000
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
0.000
ONIVA08G16460
Oryza nivara
ONIVA08G16460
N
0.000
OPUNC03G22520
Oryza punctata
OPUNC03G22520
N
0.000
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
0.000
ORUFI03G24940
Oryza rufipogon
ORUFI03G24940
N
0.000