CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22015061m.g
(
Octopus bimaculoides
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ocbimv22015061m.g
T048851_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.889
0.889
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN
NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.889
0.889
ARNT
M09459_2.00
Homo sapiens
KCACGTNN
NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.889
0.889
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.889
0.889
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.889
0.889
ARNT
M09865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.889
0.889
ARNT
M09866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.889
0.889
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.889
0.870
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC
GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC
GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY
RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC
GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB
VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.889
0.870
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22015060m.p
bHLH
60
113
ARESHCEIERRRRNKMTAYINELCDMVPTCSTLARKPDKLTILRMAVSHMKTLR
Ocbimv22015061m.p
bHLH
60
113
ARESHCEIERRRRNKMTAYINELCDMVPTCSTLARKPDKLTILRMAVSHMKTLR
Links
Other
bHLH
family TFs
Other
Octopus bimaculoides
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07610
Capronia coronata
A1O1_07610
I
A1O3_06262
Capronia epimyces
A1O3_06262
I
A1O5_11944
Cladophialophora psammophila
A1O5_11944
I
A1O9_08712
Exophiala aquamarina
A1O9_08712
I
ACLA_049580
Aspergillus clavatus
CADACLAG00004910
I
AFUA_4G10380
Aspergillus fumigatus
CADAFUAG00008049
I
ANIA_01997
Aspergillus nidulans
CADANIAG00008662
I
AOL_s00054g670
Arthrobotrys oligospora
AOL_s00054g670
I
ARB_03738
Arthroderma benhamiae
ARB_03738
I
ATEG_00873
Aspergillus terreus
CADATEAG00010200
I
AUEXF2481DRAFT_41144
Aureobasidium subglaciale
AUEXF2481DRAFT_41144
I
BAUCODRAFT_67601
Baudoinia compniacensis
BAUCODRAFT_67601
I
Bcin08g04780
Botrytis cinerea
Bcin08g04780
I
BDDG_08495
Blastomyces dermatitidis
BDDG_08495
I
CADAFLAG00002016
Aspergillus flavus
CADAFLAG00002016
I
CADANGAG00004357
Aspergillus niger
CADANGAG00004357
I
CADAORAG00001723
Aspergillus oryzae
CADAORAG00001723
I
CFIO01_11889
Colletotrichum fioriniae
CFIO01_11889
I
CH063_09026
Colletotrichum higginsianum
CH063_09026
I
CHGG_09160
Chaetomium globosum
CHGG_09160
I
CIMG_00576
Coccidioides immitis
CIMG_00576
I
CMQ_5444
Grosmannia clavigera
CMQ_5444
I
Cob_11775
Colletotrichum orbiculare
Cob_11775
I
COCC4DRAFT_133033
Bipolaris maydis
COCC4DRAFT_133033
I
COCCADRAFT_94053
Bipolaris zeicola
COCCADRAFT_94053
I
COCMIDRAFT_99994
Bipolaris oryzae
COCMIDRAFT_99994
I
COCSADRAFT_79683
Bipolaris sorokiniana
COCSADRAFT_79683
I
COCVIDRAFT_96597
Bipolaris victoriae
COCVIDRAFT_96597
I
CPC735_056690
Coccidioides posadasii
CPC735_056690
I
CSUB01_01982
Colletotrichum sublineola
CSUB01_01982
I
DOTSEDRAFT_43570
Dothistroma septosporum
DOTSEDRAFT_43570
I
DRE_06681
Drechslerella stenobrocha
DRE_06681
I
EPUS_03757
Endocarpon pusillum
EPUS_03757
I
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476
Nectria haematococca
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476
I
estExt_fgenesh1_pm.C_170061
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_170061
I
estExt_fgenesh2_pg.C_60502
Neurospora discreta
estExt_fgenesh2_pg.C_60502
I
estExt_Genewise1.C_110425
Cochliobolus heterostrophus C5
estExt_Genewise1.C_110425
I
estExt_Genewise1Plus.C_90390
Cryphonectria parasitica
estExt_Genewise1Plus.C_90390
I
EURHEDRAFT_446059
Aspergillus ruber
EURHEDRAFT_446059
I
EV44_g5988
Erysiphe necator
EV44_g5988
I
e_gw1.00609.341.1
Aspergillus carbonarius
e_gw1.00609.341.1
I
F503_01784
Ophiostoma piceae uamh
F503_01784
I
FFUJ_06125
Fusarium fujikuroi
FFUJ_06125
I
FGRRES_08617
Fusarium graminearum
FGRRES_08617
I
FOXG_03183
Fusarium oxysporum
FOXG_03183
I
FPSE_06027
Fusarium pseudograminearum
FPSE_06027
I
FVEG_02052
Fusarium verticillioides
FVEG_02052
I
G647_08374
Cladophialophora carrionii
G647_08374
N
GGTG_00870
Gaeumannomyces graminis
GGTG_00870
I
GMDG_02792
Pseudogymnoascus destructans
GMDG_02792
I
GSTUM_00001918001
Tuber melanosporum
GSTUM_00001918001
I
gw1.3.437.1
Mycosphaerella graminicola
gw1.3.437.1
I
H072_5317
Dactylellina haptotyla
H072_5317
I
H101_07848
Trichophyton interdigitale
H101_07848
I
H102_01498
Trichophyton rubrum
H102_01498
I
H105_01514
Trichophyton soudanense
H105_01514
I
HCBG_04116
Histoplasma capsulatum
HCBG_04116
D
HMPREF1120_08244
Exophiala dermatitidis
HMPREF1120_08244
I
HMPREF1624_03033
Sporothrix schenckii
HMPREF1624_03033
I
LEMA_P014910.1
Leptosphaeria maculans
LEMA_P014910.1
I
M437DRAFT_16101
Aureobasidium melanogenum
M437DRAFT_16101
I
M438DRAFT_281064
Aureobasidium pullulans
M438DRAFT_281064
I
M7I_3686
Glarea lozoyensis
M7I_3686
I
MAC_03505
Metarhizium acridum
MAC_03505
I
MAJ_00129
Metarhizium majus
MAJ_00129
I
MANI_016594
Metarhizium anisopliae
MANI_016594
I
MAPG_07622
Magnaporthe poae
MAPG_07622
I
MBR_02509
Metarhizium brunneum
MBR_02509
I
MCYG_06457
Microsporum canis
MCYG_06457
I
MCYG_06457
Arthroderma otae
MCYG_06457
I
MGG_06507
Magnaporthe oryzae
MGG_06507
I
MGU_00504
Metarhizium guizhouense
MGU_00504
I
MGYG_06906
Microsporum gypseum
MGYG_06906
I
MPH_09627
Macrophomina phaseolina
MPH_09627
I
MYCFIDRAFT_203216
Pseudocercospora fijiensis
MYCFIDRAFT_203216
I
Mycgr3G14264
Zymoseptoria tritici
Mycgr3G14264
I
MYCTH_2306491
Myceliophthora thermophila
MYCTH_2306491
I
NCU03975
Neurospora crassa
NCU03975
D
NechaG99633
Fusarium solani
NechaG99633
I
NEUTE1DRAFT_148828
Neurospora tetrasperma
NEUTE1DRAFT_148828
I
NFIA_105690
Neosartorya fischeri
CADNFIAG00010314
I
OCS_06043
Ophiocordyceps sinensis
OCS_06043
I
OIDMADRAFT_50778
Oidiodendron maius
OIDMADRAFT_50778
I
PAAG_07074
Paracoccidioides sp lutzii
PAAG_07074
I
PABG_03071
Paracoccidioides brasiliensis
PABG_03071
I
Pc22g12820
Penicillium chrysogenum
Pc22g12820
I
PCH_Pc22g12820
Penicillium rubens
PCH_Pc22g12820
I
PDE_03936
Penicillium oxalicum
PDE_03936
I
PDIP_24880
Penicillium digitatum
PDIP_24880
I
PEX1_001370
Penicillium expansum
PEX1_001370
I
PFICI_10100
Pestalotiopsis fici
PFICI_10100
I
PITC_045590
Penicillium italicum
PITC_045590
I
PMAA_040270
Talaromyces marneffei
PMAA_040270
I
PMAA_040270
Penicillium marneffei
PMAA_040270
I
PODANS_4_8860
Podospora anserina
PODANS_4_8860
I
PTRG_01511
Pyrenophora triticirepentis
PTRG_01511
I
PTT_20225
Pyrenophora teres
PTT_20225
I
PV04_10672
Capronia semiimmersa
PV04_10672
I
PV05_02968
Exophiala xenobiotica
PV05_02968
I
PV06_06720
Exophiala oligosperma
PV06_06720
I
PV07_08494
Cladophialophora immunda
PV07_08494
I
PV08_07582
Exophiala spinifera
PV08_07582
I
PV09_06507
Verruconis gallopava
PV09_06507
I
PV10_01321
Exophiala mesophila
PV10_01321
I
PV11_05741
Exophiala sideris
PV11_05741
I
PVAR5_7762
Byssochlamys spectabilis
PVAR5_7762
I
S40288_03010
Stachybotrys chartarum
S40288_03010
I
SAPIO_CDS8197
Scedosporium apiospermum
SAPIO_CDS8197
I
SBOR_3226
Sclerotinia borealis
SBOR_3226
I
SEPMUDRAFT_148618
Sphaerulina musiva
SEPMUDRAFT_148618
I
SETTUDRAFT_18480
Setosphaeria turcica
SETTUDRAFT_18480
I
SMAC_06146
Sordaria macrospora
SMAC_06146
I
SNOG_06177
Stagonospora nodorum
SNOG_06177
I
SPBR_01518
Sporothrix brasiliensis
SPBR_01518
I
TEQG_03828
Trichophyton equinum
TEQG_03828
I
TESG_05283
Trichophyton tonsurans
TESG_05283
I
THITE_2109856
Thielavia terrestris
THITE_2109856
I
TRIATDRAFT_284984
Trichoderma atroviride
TRIATDRAFT_284984
I
TRIREDRAFT_38080
Trichoderma reesei
TRIREDRAFT_38080
I
TRIVIDRAFT_135225
Trichoderma virens
TRIVIDRAFT_135225
I
TRV_06585
Trichophyton verrucosum
TRV_06585
I
TSTA_078430
Talaromyces stipitatus
TSTA_078430
I
UCRNP2_6461
Neofusicoccum parvum
UCRNP2_6461
I
V499_01136
Pseudogymnoascus pannorum
V499_01136
I
VDAG_01569
Verticillium dahliae
VDAG_01569
I
VDBG_08073
Verticillium albo atrum
VDBG_08073
I
VDBG_08073
Verticillium alfalfae
VDBG_08073
I
W97_06244
Coniosporium apollinis
W97_06244
I
X797_000547
Metarhizium robertsii
X797_000547
I
Z518_07759
Rhinocladiella mackenziei
Z518_07759
I
Z519_05789
Cladophialophora bantiana
Z519_05789
I